Providencia rustigianii: NCTC6933_03927
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Entry
NCTC6933_03927 CDS
T06047
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
prj
Providencia rustigianii
Pathway
prj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC6933_03927 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prj03400
]
NCTC6933_03927 (mutM)
Enzymes [BR:
prj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC6933_03927 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC6933_03927 (mutM)
DNA repair and recombination proteins [BR:
prj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC6933_03927 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
RNHCP
Imm3
Motif
Other DBs
NCBI-ProteinID:
VEB76641
LinkDB
All DBs
Position
1:complement(3872614..3873423)
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AA seq
269 aa
AA seq
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MPELPEVETSRRGIEPHLVGNTIAYTIVRNSRLRWPVSEQIKSLADEKVLSVQRRAKYLL
IELNKGWIIVHLGMSGSVRILTEELPEEKHDHVDLILGDGKVLRYTDPRRFGAWLWCEDL
DTSSVLAHLGPEPLSDEFNPQYLFDLAKKRKMAVKPWLMDNKVVVGVGNIYANEALFASK
ISPEKMVNQLTLADITELVKQIKKVLQRSIEQGGTTLKDFLQSDGKPGYFAQELFVYGKK
GEPCSMCGTHIESIKQGQRTTFYCPQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacttcccgaagttgaaaccagtcgccgaggcatcgaacctcacttggtcggc
aatacgattgcttatacgatcgtacgcaatagccgcctacgttggccagtaagtgaacaa
attaaaagcttagccgatgaaaaagtgctgagtgtgcagcgacgggcaaaatacctgcta
attgagctgaataagggatggattattgttcacttgggaatgtctggtagcgtacgaatt
ttgacggaagagttacccgaagagaaacatgaccatgttgatttgattcttggtgatggc
aaagtgttacgttataccgatcctcgccgttttggggcatggctatggtgtgaagatctc
gacaccagctctgtactggcgcatttaggtccagaacctctctctgatgaatttaatcct
caatacctatttgatttagcaaagaaaagaaaaatggcggtgaaaccttggttgatggat
aacaaagttgtcgttggtgttggaaatatctatgcaaacgaagccttatttgcatcaaaa
atttcgccagaaaaaatggtcaaccagctgactttggcagacatcactgagttagtgaaa
cagatcaaaaaggttttacaacgttcgattgagcagggcggaacgaccttgaaggatttt
ttacaatcagatggaaaaccgggatattttgcacaagagttatttgtttacggtaagaag
ggtgagccttgttcgatgtgcggcacgcacattgaaagcatcaaacaagggcagaggaca
acattttattgccctcaatgccaaaaataa
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