Pedobacter riviphilus: H9N25_01160
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Entry
H9N25_01160 CDS
T08657
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
prk
Pedobacter riviphilus
Pathway
prk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H9N25_01160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prk03021
]
H9N25_01160
Transcription machinery [BR:
prk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
H9N25_01160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_40
HTH_Tnp_4
Motif
Other DBs
NCBI-ProteinID:
QNR85147
UniProt:
A0ABX6THZ2
LinkDB
All DBs
Position
278184..278789
Genome browser
AA seq
201 aa
AA seq
DB search
MPVGSSNNEKALSDALREGDVNAFNLLYLKYDRKIYYNLKKLVHLEDVALELHQDVFLKV
WLNRDKINSDFPFESFLVTIAKNIAIDFYRRVLREKKLMDRLINMTTEIYDPVTDFMENK
ALGEIIEESINKLPPKRQIVFRLIKLENKSYEFVANELGVSVGTIKDHMAKASAFLKAEI
SKYDSELLVLSFISLIRIFQK
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgccagtcggatcatcaaataatgaaaaagcgctttcggatgcacttagggaaggtgat
gtcaacgcttttaatctgctctatttgaagtacgacaggaaaatctactataaccttaaa
aaactcgttcatctggaggatgtagctctcgaattacaccaggatgtatttttgaaggtt
tggctaaaccgcgataaaataaattcagatttcccttttgaatcatttttggttacaata
gctaaaaatatcgctattgatttttataggagggtactgcgcgaaaaaaagctaatggac
cggctgataaacatgacaaccgaaatttatgatcctgtgactgatttcatggagaataaa
gcacttggcgaaattattgaagaaagcattaataagttaccgccaaaacgacagatcgta
tttcgtttgatcaagttagaaaataagagttacgaattcgttgctaatgagttaggcgtt
tctgttggcacaattaaagatcatatggcgaaagcctcagcattcctaaaagctgaaata
agcaaatacgattcagaactgttggtactttctttcataagcctgattcggatttttcaa
aaatag
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