Pedobacter riviphilus: H9N25_03000
Help
Entry
H9N25_03000 CDS
T08657
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H9N25_03000
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prk01007
]
H9N25_03000
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prk03016
]
H9N25_03000
Enzymes [BR:
prk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
H9N25_03000
Amino acid related enzymes [BR:
prk01007
]
Aminoacyl-tRNA synthetase
Class II (U)
H9N25_03000
Transfer RNA biogenesis [BR:
prk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
H9N25_03000
Prokaryotic type
H9N25_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Myosin_TH1
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
QNR85465
LinkDB
All DBs
Position
742302..744701
Genome browser
AA seq
799 aa
AA seq
DB search
MKISYNWLKQFVQIDKTPQELSLILTNVGLEVESVEKVQPVVGGLEGLLIGEVLTCVQHP
NADRLRITTVNVGGKENLQIVCGAPNVGAGQKVVVATVGTTVYPLEGEPFKIKESKIRGE
LSQGMICAEDEIGLGKSHDGIMILAEDTEVGIRAKDHFKMDDDFVFEIGLTPNRADAASH
LGVARDLAAYFRSEYEMPDLSAFKTDNENLVIPVEVEDLAACPRYSSLTVSGVTVKESPE
WLKDKLKVIGLRPINNVVDITNYVLHGLGQPLHAFDADKITGGKVIVKKVAEGTPFVTLD
DVERKLSADDLMICNAEAPMCIAGVFGGKSSGVDTETKNIFLESAYFNSVSVRKTSKRHG
LKTDASFRFERGTDPEITVTALKYAALLIKELAGGEISSSVSDIYPNHIKPFEFEVSYTN
INKLIGANIPSAEIKHIITALGISATNTSDDTLALRVPSFKVDVTRECDITEEVLRIYGY
NNIEIPSKVNASLSYSIKPEKENTHNVIADMLTANGYAEIMCNSLTKSAYSKNLDEAVFI
LNPLSSDLNVMRQNLLMPALESVAYNQNRKNADVKFYEFGKTYHLINEQYVERPRLLLLI
SGAKQSEQWNQNAKPVTFYNLKSAVDAILSRLGIASYQSDVLNDENFAYGIKYFRGDKTL
VSFGAVSKADRKVADVNAEVFYADFDWATLLDIVRKNTIVHKDVSKYPQVRRDLSLLIDQ
NVTFDTLKGIAFKTDKKLIKAVGVFDVYVGDKLPEGKKSYALNFILQDEEQTLTDKQIEN
TMQKLIANLTAQAGAEIRK
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatatcatataactggttaaaacaattcgtacaaattgataaaacacctcaagaa
ctttcgttaatcctcaccaatgttggtttagaagtagaaagtgtagaaaaagttcagcct
gtggtgggcggtttagagggattacttattggcgaagtattaacctgtgttcagcatccc
aatgccgatcgtttgcgtattactactgttaatgttggcggtaaagaaaacctgcagatt
gtatgcggtgcgccaaatgtaggtgctggccaaaaagtggtggtagctacagtgggtaca
acggtatatcctttagaaggagagccttttaagataaaagaatcaaaaattaggggagag
ctttctcagggaatgatctgtgccgaagatgaaattggcttaggtaaatcgcatgatggg
attatgatccttgcagaagataccgaagtgggtatccgtgcaaaagaccattttaaaatg
gatgatgattttgttttcgaaatcggattaacgccaaaccgtgccgatgcggcttcgcat
ttaggtgtggcgagagatttagctgcttatttcagaagtgaatatgaaatgcctgatctt
tctgctttcaaaaccgataacgagaatctggttatccccgttgaagttgaagatttagcg
gcttgcccacgttatagcagccttaccgtttctggtgttactgtaaaagaatcgccagag
tggttaaaagataaattaaaggtaattggtttgcgcccgattaataacgtggttgatatc
accaattatgtacttcatggtttaggtcagcctttgcatgctttcgacgccgataaaatt
actggtggaaaagtaattgttaagaaagttgcagaaggaacaccttttgtaacgcttgat
gatgtagagcgcaagctgagtgcagatgatttaatgatctgcaatgctgaagcaccaatg
tgtatcgcaggggttttcggtggaaaatcttctggtgttgataccgaaaccaaaaatatt
ttcttagaaagtgcttactttaattcggtttctgttcgtaaaacttcgaaaagacatggc
ttaaaaaccgatgcatctttccgttttgagcgtggtaccgatccggagattacggttacg
gctttaaaatacgcggctttattaattaaagaactggctgggggagaaatttcctcatca
gtttctgatatttacccaaatcatatcaagccctttgagtttgaagtaagttataccaac
attaataaattaattggtgcaaatatcccttcggccgaaatcaaacacattattacagct
ttagggatttcggcaaccaatacatctgacgatactttggctttaagggtgccatcattt
aaagtggatgtaacccgcgaatgcgacattacagaagaggtattgcgtatttatggttat
aataacatcgaaatcccttcaaaggtaaatgcatcactttcttacagcattaagcccgaa
aaagaaaatacccataatgtaattgcagatatgctaaccgctaatggttatgcagaaatt
atgtgcaactcgttaactaaatcggcctattcgaaaaatttagatgaggcagtatttatt
ttaaatccgttaagtagcgatttaaatgtaatgcgtcaaaatttattgatgccggcttta
gaaagtgtagcttacaaccagaaccgtaaaaatgccgatgtgaagttttacgaattcggt
aaaacttatcatttaatcaatgagcaatatgtagagcgcccaaggctgttattgttgatt
tcgggggctaaacaaagcgaacaatggaaccaaaatgctaaaccggtaactttttataat
ttaaaatcagctgttgatgccattctatctcgtttgggcattgcaagttatcaatctgat
gttttaaacgatgaaaactttgcttacggaattaaatatttccgtggagataaaaccctg
gtaagtttcggtgctgtttcaaaagccgaccgtaaagtggctgatgtaaatgccgaagta
ttttatgctgatttcgattgggcaaccttgttagatattgtaaggaaaaatacaattgtg
cacaaagatgtttctaaatacccgcaggttcgccgcgatctttcattgttgattgatcag
aatgtaactttcgataccttgaaaggtattgcgttcaaaaccgataaaaagctgatcaaa
gcggttggtgtattcgatgtatacgttggcgataaattaccagaagggaaaaaatcttat
gccctgaattttatcttacaggatgaagaacaaaccttaaccgataagcagatcgaaaat
acaatgcagaaactaatcgcgaatttaacggcacaagctggtgcagaaattaggaaataa
DBGET
integrated database retrieval system
