KEGG   Pedobacter riviphilus: H9N25_03205
Entry
H9N25_03205       CDS       T08657                                 
Name
(GenBank) HD domain-containing protein
  KO
K00974  tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]
Organism
prk  Pedobacter riviphilus
Pathway
prk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:prk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H9N25_03205
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:prk03016]
    H9N25_03205
Enzymes [BR:prk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.72  CCA tRNA nucleotidyltransferase
     H9N25_03205
Transfer RNA biogenesis [BR:prk03016]
 Eukaryotic type
  3'processing and CCA adding factors
   CCA adding factors
    H9N25_03205
 Prokaryotic type
    H9N25_03205
SSDB
Motif
Pfam: PolyA_pol PolyA_pol_RNAbd HD tRNA_NucTran2_2 NTP_transf_2
Other DBs
NCBI-ProteinID: QNR85499
LinkDB
Position
complement(785867..787321)
AA seq 484 aa
MQFNLNEGNNESPSGDLGVHLQNPIFKTLSLIADKNKTEAYVIGGFVRDLFLDRPSKDID
VVVVGSGIAYAEAVGRKLNTKVAVFKNFGTANIKFQDLEVEFVGARKESYRSDSRKPIVE
DGSLEDDQLRRDFTINALAINLNADHYGELLDPFDGIKDLENKLIRTPLDPEITFSDDPL
RMMRAIRFASQLNFNIDPVALNAIKTQKQRIGIVSKERITDEMNKIILSKKPSIGFKHLF
DTGLLHIIFPQMAQLYGVEIIKGKGHKDNFYHTLEVLDNICADTDDLWLRWAAILHDIAK
PATKRFEEGHGWTFHGHEDRGARMVPKIFAQLKLPLNEKMKYVQKLVQLHLRPIVLAQET
VTDSAVRRLLFDAGEEIESLMLLCNADVTTKNEYKKTKYRNNFELVKQKLKDVEERDKIR
NWQPPISGNDIMETFGLEAGREVGIIKNAIREAILEGEITNDYREAFNFMLNQAKQMGLN
PVNK
NT seq 1455 nt   +upstreamnt  +downstreamnt
atgcaatttaatttgaacgaggggaacaacgagtccccttcaggggatttaggagttcac
ctgcaaaacccaatatttaaaaccttatcattaatcgccgataagaataaaactgaagcg
tatgtaatcggaggatttgttcgtgatttatttttagatcgaccttcaaaagatattgat
gtggttgttgtaggtagtggaatagcatatgctgaagctgttggcagaaaactgaacact
aaagttgctgtttttaaaaattttggtacagcaaatattaaatttcaggatttagaagta
gagtttgtgggtgcccggaaagaatcttatcgctctgattcgcgtaaacccattgttgaa
gatggcagcctggaagatgaccagctgcgcagagattttaccatcaatgctttggcgatt
aatttaaatgctgatcattatggtgaactgctagatccgtttgacgggattaaagacctg
gaaaataagctcatccgcacaccacttgatcctgaaattactttttctgacgatcctttg
cgcatgatgagggcaatccgctttgcctcccagcttaatttcaatatcgatccggttgcc
ctaaatgccattaaaacacaaaaacagcgcatcggtattgtttcaaaagaacggatcaca
gatgagatgaataaaattattctctctaaaaaaccttcaataggttttaaacatcttttt
gataccggattattacatattatttttcctcaaatggcgcagctctatggcgtagagatt
attaaaggaaaaggccataaagacaatttctaccatactttagaagtattggataatatt
tgtgcagatacggatgatttatggttgcgctgggctgctattttacacgatattgccaaa
cctgctaccaaacgttttgaagaaggccacggctggacattccacggccatgaagacaga
ggcgccagaatggttccaaaaatatttgcacagctaaaacttcctttaaacgaaaagatg
aagtatgtgcaaaaattggtgcagcttcatttacgtccgattgtgctggcacaggaaacc
gttacagattctgctgtaaggcgattactttttgatgccggagaggaaattgaaagcctg
atgttgctctgcaatgccgatgtaacaacgaaaaacgaatacaaaaaaacaaaatataga
aacaactttgagctggttaaacaaaagcttaaggatgtggaagaacgcgataaaattaga
aactggcaacctcctatttcaggaaatgatattatggaaacttttggtcttgaagcggga
agagaagttggcataattaaaaatgccatccgtgaggccatactggaaggtgagattacg
aacgactatcgggaagcatttaattttatgctcaatcaggcaaaacaaatgggattaaat
cctgttaataaataa

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