Pedobacter riviphilus: H9N25_05240
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Entry
H9N25_05240 CDS
T08657
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00300
Lysine biosynthesis
prk00470
D-Amino acid metabolism
prk00550
Peptidoglycan biosynthesis
prk01100
Metabolic pathways
prk01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
H9N25_05240
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
H9N25_05240
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H9N25_05240
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
H9N25_05240
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prk01011
]
H9N25_05240
Enzymes [BR:
prk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
H9N25_05240
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
H9N25_05240
Peptidoglycan biosynthesis and degradation proteins [BR:
prk01011
]
Precursor biosynthesis
Amino acid ligase
H9N25_05240
Racemase
H9N25_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QNR85856
UniProt:
A0ABX6TLQ8
LinkDB
All DBs
Position
1253656..1256115
Genome browser
AA seq
819 aa
AA seq
DB search
MQNPIYTITKIAEILNADAKLIDGQVIIQYLVVDSRSVLVPENAVFFALSSHRNGHEFIK
DAYTKEIRNFVITEPKYINEYPDCNFLLVDDTLVALQKLAIEHRNKFDLKTIGITGSNGK
TIVKEWLYQLLAADFNIVKSPKSYNSQIGVPLSVWQIEADHTLGIFEAGISAVNEMQHLA
EIIRPEIGILTNIGEAHAEGFASKKEKLTEKLKLFATSELFIYSPEYVTEITAKELPGKK
QFSWSSKQTADLQVIAVEPIEGNCYLRAIYQNREIECILPFKDKASIENGMICWATLLAL
GYTPEQADLRLEKLSHVSMRLELKNGINQCSIIDDSYSADISSLAIALDFLNQQNQHEKK
TVILSELFETGRDDLDLYTEIAELLLQKKVNRLIGIGTHISKYGSLFKFETQFFDDTNAF
IDAFPGLQFNHETILVKGARRFEFGRISKLLTQKIHDTVLEIDLNAMVNNLQFYRSKIKP
GVKIMAMVKAFSYGSGSFEIANLLQFHKVDYLAVAYADEGIALRKAGITLPIMVMSPEES
AFDALIKHKLEPEIYSIEILDSFLNALSDYDFDYPIHVKIDSGMHRLGFDQPEIDALCNV
LRDSARVKVQSIFSHLVASDAAEHDGFTQQQIERFKIIANQLVDVLGYKPLLHISNTSGI
SRWPEGQMDMVRLGIGLYGFDSALTNNRGLQTVMVLKTTVTQVKTLAPGETVGYSRKGVM
PNGGKIATVKIGYADGYTRYFGNGVGKMLINGHLVPTIGSICMDMTMLDITGIDVKPGDE
AIVFNKEHTIMQLAEDIGTIPYEILTNISQRVKRVYFYE
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatccaatatacaccatcaccaaaatagccgaaattttaaatgccgatgccaaa
ttaattgatggacaggtaattattcaatatttggtggttgatagccgttcggtgctggtc
cctgaaaacgctgtgttttttgccctgtcttcgcaccgcaatgggcatgagtttattaaa
gatgcttacacaaaggaaatcaggaattttgtaattaccgaacctaaatacattaacgaa
tatcctgattgcaattttttactggttgatgatactttggtggcgctacaaaagcttgcc
attgaacaccggaataaatttgacctgaaaacaatcggcattactgggagtaatggaaaa
acaatcgttaaagaatggctttaccagcttttggctgccgattttaatattgttaaaagc
ccgaaaagttataattcacaaataggtgtgccgctttcggtatggcagattgaggccgat
catacgctcggcatttttgaagcgggcatctctgcagttaatgagatgcagcacttagca
gaaattatccgtcctgaaatcggaatcttaaccaatatcggtgaggcacatgcagaagga
tttgcttctaaaaaggaaaaactaaccgagaaactgaagctttttgctacttccgaacta
tttatttattcgcctgaatatgtaaccgaaattacagcaaaagaacttcctggtaaaaaa
cagtttagttggagcagtaaacaaacagcagatcttcaggttattgccgttgaacccatt
gaaggaaactgttatttacgtgccatttatcaaaatagagaaattgaatgcattttgcct
tttaaagataaagcttcgatagaaaatggaatgatctgctgggcaaccttattggcttta
ggttatacaccagagcaagccgatttacgtttagaaaagctgagtcatgtgagtatgcgt
ttagagctgaaaaacgggattaaccaatgttccattatcgacgattcttacagtgccgat
atttcttcattggccattgcccttgattttttaaatcaacagaatcagcacgaaaagaaa
acggttatcctttccgaattatttgaaacgggcagagatgatttagatttatacacagaa
atagccgaactgcttttacagaagaaagtaaaccgactaattggaattgggactcacatt
tcgaagtatggcagcctctttaagtttgagacacagtttttcgacgatacgaatgctttt
atcgatgcttttcctggtttacagtttaaccacgaaaccatattggtaaaaggagccagg
cggttcgaatttggccggattagtaaactccttacccagaaaatacacgatacggtttta
gaaatcgacctgaatgccatggtgaataacctgcagttttaccgctctaaaattaagcct
ggtgttaaaataatggccatggttaaggccttttcatatggaagcggaagtttcgaaatt
gccaatttactacagttccataaagtggattatctggcggtagcttatgccgatgaaggc
attgctttacgtaaagcgggtattactttgcccattatggtgatgagccctgaggaatct
gctttcgatgcccttattaaacacaagctcgaacctgaaatttacagcatagaaattctg
gatagttttttaaatgcgctgtctgattatgatttcgattacccgatccacgttaaaata
gatagtggcatgcaccgtttgggctttgatcagccagaaattgatgcattgtgtaatgtg
ctgagagattcggcgagggtaaaagttcaaagtattttttctcacctggtggcaagcgat
gctgcagaacacgatggctttacccaacaacaaattgaaagatttaaaatcatcgcgaat
cagttggtcgatgttttaggctataaaccgctgctgcatatttctaatacttctggcatt
tcgcgctggcccgaagggcaaatggatatggtacgtttgggcataggtttgtatggtttt
gattctgctttaaccaataaccggggtttgcagactgtaatggtactaaaaactacggtt
acccaagtgaaaactctagctccgggcgaaactgttggatatagcaggaaaggcgtaatg
ccaaatggcggaaaaattgccactgtaaaaattggctatgctgatggatacaccaggtat
tttggtaatggtgttggtaaaatgctcattaatggccatttggtgcctacaattggctcg
atttgtatggatatgaccatgttggatattacaggaattgatgtgaaacctggcgacgaa
gctattgtttttaataaagaacataccattatgcagttagcagaagatattggtactatt
ccgtatgaaattctgaccaatatctcgcaaagagttaaaagggtttatttttatgagtaa
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