Pedobacter riviphilus: H9N25_05630
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Entry
H9N25_05630 CDS
T08657
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_05630
Transporters [BR:
prk02000
]
Other transporters
Pores ion channels [TC:
1
]
H9N25_05630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
TTR_TEN1-4
Motif
Other DBs
NCBI-ProteinID:
QNR87089
LinkDB
All DBs
Position
complement(1361139..1364099)
Genome browser
AA seq
986 aa
AA seq
DB search
MLLLSASAFAQSVIKGTVLDSDKLPMAGVTIQVKPGTAKAQTDTEGKYSITAPAGSSQLV
FSFVGMETQTVSINNQTVINITMASLNNLEAVVVVGYASVRKNDLTGAATTVSAKDFNKG
PLNAPDQLIQGKVAGVQMINNSGQPGGASTVRIRGNSAITGTGQPLYVVDGVALDGRSAR
PSTNAGVAGLTASAGTGTTPDGNPLNFINPADIESMEILKDASATAIYGSRAAYGVVLIT
TKRGKSGETKIDISASAGVGSIARKVDVLSGDEYRAALKKYNLTAGDFGSNVDALDAITR
TAYNQNYSVGISGGSNGNTFRASLGYQNQQGIIRSTDFKKYSAGFNGNFKFLESKKLGLD
VNMISNQYLENIAPITTDAGFTGSLISQALSWNPTQSFYKPDGSLFIDYGSTTINPLAAL
AANSDKTKVSTILGSVSPYYKIAPWLEYRMLASVNYSSGIRRASTRSFLNLQGIQPDGNF
LGGFASYSTTELITQQFTNTLNFNKEVVNKLNLNAIIGYEYSNFINKGTINTATGFGDIA
ADYTDAFQTTAPANRTFAAFNNPTTQLQSYFARAIFNYDSKYILTATFRADGSTKFGKSN
RYGYFPSFAAAWDIKKEAFLSDAGWLDQLKFRVGYGKTGNQDFPSGSAQQRYDFGNTNGQ
PTLIAINNANPNLKWQSDKQANVGVDFGFLGNKLTGSIDYFNKTTNDLLFPQISFVPAVG
GNVPTWVNLPGQIINKGLELSLNGTIIDNDNVTWSLAGNATFIKNKVQNISGIIKTGALN
GQGLSGVTTEVIQNGLPLFAMVTRQYNGLDANGFSQYTDDGFTNYYVGNPNPKVIMGLST
NVRYKKLSFSANFNGAFGQSIYNNTANSVLAISNLGTRNVSAALVNQSITESLANPIAAS
SRYIEKGDYVKLANATISYNIGNIGKSIKSLNIYVNGQNLFVITNYTGFDPEVNVNKSVS
GVPSAGIDYTAYPTARTFNFGVNFSL
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgctcagcgcatcggcttttgcacaaagtgtaatcaaaggcaccgtgctcgac
agtgataaattacctatggccggtgtaaccatacaggtaaaaccaggcactgcaaaggca
cagacagatactgagggaaaatattccatcactgccccagcgggctcttcacagcttgtt
ttcagctttgtaggtatggaaacccaaacagtaagcattaataaccaaaccgtgatcaat
atcaccatggcgtccttaaataacctggaggcagttgtagttgtgggttatgcctcagta
aggaaaaatgatttgaccggggctgccacaactgtctcggcaaaagattttaataaaggg
ccgctaaatgcacctgatcaattgattcagggtaaagttgccggtgtgcagatgatcaac
aatagtggccagccaggcggtgcatcaactgtccgtattagaggaaactctgctataacc
ggtaccggacagccgctgtatgtggtagatggtgttgctttggacggaagatcggccagg
ccatcaaccaatgcgggtgttgcaggtttaactgccagcgcaggtaccggaaccaccccg
gatggcaaccctttaaactttatcaacccggccgatatcgaatcgatggaaatccttaaa
gatgcatcggcaactgccatttatggttcgcgtgcggcttacggtgtggttttaattacc
acgaaaagaggaaaatcgggagaaacgaaaattgatatcagcgcatccgccggcgttggc
agtatcgccagaaaggtagatgttttaagcggggatgaataccgggcagcattgaaaaaa
tacaacctcaccgctggcgattttggctctaacgtagatgcattggatgccattacccgt
acggcttacaatcagaattattctgtaggcattagcgggggcagcaacgggaatactttc
cgtgcatcactgggctatcagaaccaacagggaattatcagatccaccgattttaaaaag
tacagcgcaggctttaacggtaattttaaatttttggaaagtaaaaaactggggctggat
gttaacatgatcagcaaccagtacctagagaatattgccccaatcactactgatgcgggt
tttacaggtagtctgatcagtcaggctttatcctggaaccccacacagtcgttttacaaa
ccggatggtagcctgttcatagattatggctctacaactatcaatccacttgctgccctg
gccgcaaacagtgataagaccaaggtatctaccattttgggcagtgtttctccgtattac
aaaatcgccccatggctggaataccggatgctggcaagcgtaaattacagtagcgggata
aggagggcgtcgacaagaagttttcttaacttacagggcatacagccagatggtaatttc
cttggcggttttgcaagttattcaaccaccgaacttattacccagcagttcacaaacacc
ttgaactttaacaaagaagttgtaaacaaactgaatctaaatgccatcatcggttatgaa
tattcaaatttcatcaataaaggaacaatcaataccgctacgggctttggcgatatcgcg
gcggattatacagatgcattccagactaccgcgcctgcaaaccgtacatttgcggctttt
aacaatcccacaacccaattacagtcttattttgcaagggcgatcttcaattacgacagt
aaatatatattaacagctactttcagggcagatggttcgaccaaattcggaaaatctaac
cgttatggttatttcccatcttttgccgctgcctgggatatcaaaaaagaagcattcctt
agtgatgctggctggttagaccagctgaaattcagggttggttatggcaagaccggtaac
caggatttcccatcaggatctgcacaacaacgttatgattttggcaacaccaatggccag
ccgaccttaattgccattaacaatgcaaacccgaacctaaaatggcaatctgacaaacag
gcaaacgttggggttgattttggttttctgggaaataagcttaccggatccattgattat
tttaacaaaaccaccaacgacttgttatttccccagatttcgttcgtacctgctgtcggg
gggaatgtacctacatgggtcaacctgcctgggcagatcatcaacaaagggctggagttg
agccttaatggaacgattatcgacaacgacaacgttacatggagtttagccggtaatgca
actttcattaaaaacaaagtccagaacatatcgggaattatcaaaacaggtgcactaaac
ggccagggtttgagcggggtaactactgaagtaatccaaaacggcttgccattgtttgca
atggttaccagacagtataacggtttagacgcaaatggattctcccagtataccgatgat
ggttttaccaattattatgtaggcaaccccaaccctaaggtaattatgggattaagcaca
aatgtaaggtataagaaactttctttttcggccaactttaacggcgcattcggtcagagc
atttacaataatacggcaaattcggtgttggccatttcaaatttaggcacgcgcaatgtt
tccgctgcactggttaaccaatccattacagaatcacttgccaaccctattgcagcatca
tcaaggtatatcgaaaaaggagactatgtaaaactggccaatgcaaccatcagttataat
atcggcaacatcggcaagtcgatcaaatccctgaacatctatgttaacggacaaaacctc
tttgtaattaccaactatacgggtttcgatcctgaggtaaacgtaaacaaaagtgtaagt
ggagtgccctctgccggtatagattatacggcctaccctactgccaggactttcaatttt
ggtgttaatttttctctttaa
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