Pedobacter riviphilus: H9N25_07500
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Entry
H9N25_07500 CDS
T08657
Name
(GenBank) AAA family ATPase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
prk03009
]
H9N25_07500
03012 Translation factors [BR:
prk03012
]
H9N25_07500
Enzymes [BR:
prk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
H9N25_07500
5.6.2.5 RNA 5'-3' helicase
H9N25_07500
Ribosome biogenesis [BR:
prk03009
]
Eukaryotic type
Other ribosome biogenesis factors
H9N25_07500
Translation factors [BR:
prk03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
H9N25_07500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
AAA_19
Viral_helicase1
ResIII
AAA_22
Helicase_RecD
UvrD-helicase
PhoH
DEAD
SLFN-g3_helicase
UvrD_C_2
Herpes_ori_bp
AAA_16
PIF1
ATPase_2
T2SSE
AAA_24
AGO_N
nSTAND3
Pannexin_like
AAA
cobW
SMUBP-2_HCS1_1B
NPHP3_N
HEM4
AAA_25
AAA_7
UvrD_C
SNF2-rel_dom
Flavi_DEAD
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QNR86241
LinkDB
All DBs
Position
1840461..1842374
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AA seq
637 aa
AA seq
DB search
MPKEYFKKLQDLLDTERNEDLQSYLKLTENTSAADRRALGLTWYPIAIRNTEIGRGDYLT
VELERTTHQDFSHQFRFGSAVVLFSNHDAKEDRVEGIINHQSGSRMKISFRIDELPDWTR
DGKLGVDLLFDNNSYDEMQNALKQASYLAENESENKLIRILTKGEKPSFQGEEKFIIPNT
LNDSQQLAVNKIIAADDLAVVHGPPGTGKTTTLVHAIKSLVKHSDQKILVVAPSNTAVDL
LTEKLAAEGLKVIRVGNPARVSEKLLAATLDHQMADHPEMKTIKALKKQASEYKNMAHKY
KRSFGKAEREQRKALFDEAHKIGKEVEKTEQYIMDNLFTKAQIITATLVGANHYTVRNLK
YNTIVIDEAGQALEPACWIPILKAQKVILAGDHFQLSPTIKSNEAARNGLSNTLLEKTVN
LHPESVVLLKEQYRMNKDIMGYSSRVFYKNELQAHDSVADHLLFTSDQPIQFIDTAGCSF
DEKLDGTSTTNPDEAAFLVKHLTHLVACLADQTLTESFPSIAIVSPYKQQVQILNALVQE
NEILTPYRNKIAVNTIDSFQGQERDVVYISLTRSNGDGSIGFLSDTRRMNVAMTRARKKL
VVIGDSATLSKSNFYAEFIQYAEQLNAYHSAWEFMEL
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
ttgccaaaagaatattttaaaaaacttcaagatctgctcgataccgagcgcaacgaagat
ttacaatcgtacttaaaacttactgaaaatacttcagctgccgataggagggcattgggt
ttaacctggtacccgattgccatcaggaatactgaaataggccgtggcgattatttaacg
gtagagttagaaaggactacccaccaggatttttctcatcagttccgttttggttctgcc
gtggtattattttccaatcacgatgccaaagaagaccgcgtagagggaatcataaaccat
caaagtggtagcaggatgaaaatcagcttccgtattgatgaattgcccgattggacaaga
gacggtaaactcggcgtagatttactttttgataataacagctatgatgagatgcagaat
gcgcttaagcaggcctcgtatttagctgaaaatgaatcagaaaataaactgatccgtatt
ttaacaaaaggagaaaaaccatcatttcaaggtgaagagaaatttatcattcccaataca
ctaaacgattcacagcaattagcagtgaataaaattatagcggctgatgacctggctgtg
gttcatggtcctccaggcaccggaaaaacaacaacgcttgtgcacgctataaaatcgtta
gttaagcacagcgatcaaaaaatcctggtggtggcaccgagtaataccgctgttgattta
cttacggagaagttagctgccgaagggctaaaagtaatccgtgtgggtaacccagcaagg
gtttctgaaaagttgcttgcggcgactcttgatcatcaaatggcggatcatccggagatg
aaaacgattaaagctttaaaaaaacaggccagtgaatataaaaatatggcccacaaatac
aagcgaagttttggtaaagcagaacgcgagcaacgtaaggccttgtttgatgaagcgcat
aaaattggaaaggaagtagaaaaaacggagcagtacattatggataatctgtttaccaaa
gcacagattattaccgccaccttagtaggagccaaccactatactgttaggaatttaaaa
tataataccattgtaattgatgaggcgggccaggctttggaaccagcttgctggataccg
attttaaaagcgcagaaagtaatattggctggtgatcattttcaactttcgccaaccata
aaatcaaatgaagcagcaagaaatgggttaagtaatactttactggagaaaacggtaaat
cttcatccagagtcggttgtgttgttaaaagagcaatacagaatgaataaagatattatg
ggttactcatctcgggtattttataaaaatgagctgcaggcccatgattctgttgccgat
catttattgtttactagcgatcaaccgattcaatttatcgatacggcaggctgtagtttc
gacgaaaaattagacgggaccagtacaaccaatcctgatgaagctgcatttttggtcaaa
catttaacgcatttggttgcttgtttggcagatcaaaccttaacagaaagctttccatct
attgctattgtttcgccatataaacagcaggttcagatcttaaatgccctagttcaggaa
aatgaaattttaacaccttatcgcaataaaattgcagtaaataccattgatagctttcaa
ggtcaggaacgcgatgtggtatatattagcctcaccaggagtaatggggatggaagtatc
gggtttttatcggatacgaggagaatgaatgtggccatgactagggcaaggaaaaagctg
gttgttattggcgatagcgctacattatcgaaatctaatttttatgctgaatttatccag
tatgcagaacaattgaatgcctaccacagcgcctgggaatttatggagttgtaa
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