Pedobacter riviphilus: H9N25_07505
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Entry
H9N25_07505 CDS
T08657
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prk03032
]
H9N25_07505
Enzymes [BR:
prk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
H9N25_07505
DNA replication proteins [BR:
prk03032
]
Prokaryotic type
DNA Topoisomerases
H9N25_07505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Mac-1
Motif
Other DBs
NCBI-ProteinID:
QNR86242
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Position
complement(1842428..1844281)
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AA seq
617 aa
AA seq
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MKIVIAEKPSVGRELAKVFGATTRKDGYIEGKGYSFTWAFGHLLQLAPPQDYGFIGWRKQ
HLPMLPQKFKLAVRKIKTKDGFVEDPAVRKQLDTIKKLFDEASEIIVATDAGREGELIFR
YIYYYLKCKKPFKRLWISSQTDEAIKDGFRNLKPGTDYDTLFNSAHCRSESDWLVGMNAT
QALSISAGNRTVLSLGRVQTPTLAMICARFLEIKNFVPQTYYQISILLSKDEQVFKAIST
ANYKEKEEVEKLFALVEDVASGFPTGGNITAVEAKPRKEPPPLLHDLSSLQQEANKKKGY
TADQTLNILQNLYESKLVSYPRTGSRYIGDDIFAGVPDLIAKFTDHADFGKQAQFLQTIT
LNKRSVNAKKVTDHHAVLPTGEQAYGLSPDKQAVYDMVVGRMIEAFHQECIKELTKITIQ
SGVTFVANGTVIRSAGWRAVFNDPEDDKKDEDNAALPKVAVGEQLPITEKSLLEKQTKPK
PMYNEASLLKALETCGKEIEDEELRYAMKDSGLGTPATRASIIETLITREYITREKRSLV
PTNKGLAVYEVVKDKQIAQAELTGQWEKRLEEIRSGSSVKDFKSEITEYTKTITHELLIA
GASISGKLEEEKKLEKV
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtaattgcagaaaagccctctgttggtcgtgaacttgctaaagttttcgga
gcaaccaccagaaaagatggatacattgaaggtaaaggatattcttttacctgggcattc
gggcatttattacaattggctccacctcaggattatggctttatcggctggaggaagcaa
catttacccatgctgccgcaaaagtttaaacttgctgtcagaaagattaaaacaaaagat
ggttttgtagaagatccggctgtgcgcaaacaattagacaccataaaaaaactttttgat
gaggcgagcgaaattattgtggcaacggatgcggggcgtgagggtgaattaattttcagg
tacatttattattacctgaaatgcaaaaaaccatttaaacgcctctggatctcctcacaa
acagatgaagctataaaagatggattcagaaacttaaaacccggaacagattacgatact
ttgttcaattcggcccattgccgttcagaatcagattggctggtgggaatgaacgccaca
caggctctcagtatttcggcaggtaacagaacagttctttcgttaggtcgcgtacaaaca
cctaccctggccatgatctgtgcccgttttttggagattaaaaatttcgttcctcaaacc
tattatcagatcagtattttactttctaaagatgaacaggtttttaaagctatatcaacc
gctaattataaagaaaaggaagaggtagaaaagttatttgcacttgttgaggacgtggct
tctggctttccaacgggcgggaacatcacagctgtagaagctaaaccaagaaaagaaccg
cctccgttattgcatgacttaagcagtttgcagcaagaagccaataagaaaaaagggtac
actgccgatcaaacacttaacatcttgcagaacctatacgagagtaaattggtttcttat
ccccgtaccggatcgcgctatattggtgatgatatttttgctggcgttccagatttgatt
gcaaaatttaccgatcatgctgattttggaaaacaagcgcagtttttgcaaaccattact
ttaaataagcgaagtgttaacgctaaaaaagtaaccgatcaccatgcggttttacctacc
ggcgaacaggcttatggattgagcccggataaacaagccgtgtatgatatggttgttggg
cgaatgattgaggcatttcaccaagaatgtattaaggagttaaccaaaataaccattcaa
tcgggagttacttttgtggccaatggaacggtaatccgctctgcaggctggcgtgctgtt
tttaacgaccctgaagacgataaaaaagatgaagacaacgcagctctaccaaaggttgcg
gttggagaacaattacctataacagaaaaatctcttttagaaaaacaaactaaacctaag
ccaatgtacaacgaggcttcgctattaaaagcactcgaaacctgtggtaaagagattgaa
gacgaagaattacgttatgccatgaaagatagcggtttaggtacaccagcaacacgtgca
tccattatcgaaaccttaattaccagggaatatattacaagagaaaagcggagtcttgta
cctaccaataaaggtttggctgtttacgaagtggttaaggataaacagattgcgcaggct
gaacttaccggacagtgggaaaaaagattggaagaaatccgttcgggttcatcagtaaaa
gattttaaatccgaaattacagaatatactaaaaccattacgcacgaactattaattgca
ggggcaagtatatcgggtaagcttgaagaagaaaagaaactggaaaaagtttag
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