Pedobacter riviphilus: H9N25_09550
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Entry
H9N25_09550 CDS
T08657
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
prk
Pedobacter riviphilus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
AAA_5
HTH_8
AAA
Mg_chelatase
AAA_3
AAA_22
Phage_T4_Y12K
FleQ
HTH_19
Motif
Other DBs
NCBI-ProteinID:
QNR86606
UniProt:
A0ABX6TNW7
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Position
2334329..2335732
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AA seq
467 aa
AA seq
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MAKLLIIDDERAIRSTLREILEYENYDVEDIDNGIDGLEMIKKGNFDLVLCDIKMNKMDG
MEVLEQAQIIKPDLPFIMISGHGTVETAIEASKKGAFDFISKPPDLNRLLITVRNGLDRG
NLVTETKVLKRKASKTREILGESESISKIKETIERVAPTEARVLITGANGSGKELVARWL
HEKSNRADSPLIEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFELANGGTLFLDEI
GDMSLSAQAKVLRALQEHKISRVGGEKEIEVNVRVLAATNKDLLKEIEDGNFRMDLYHRL
NVINIHVPHLTERTDDIPVIAQNFLESICSDYGMPVKKINDGGMAALKALPWTGNVRELH
NMIERLIILSDKVITENDVRAFANPGGGTNIGAASSAQIPGAGGLSLSSSFDSFNNFQDY
KDHAEREFIKFKLEKNNWNVSKTADEIDIQRSHLYSKIEKFGLKRAE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggctaaattattaataattgacgatgagcgtgcgataaggagtaccttacgcgaaatt
ctagagtatgagaattacgatgttgaagatatcgataacggtattgacggtctcgaaatg
atcaaaaaaggaaatttcgatctggtactttgcgatatcaagatgaataagatggatggt
atggaagtgctcgaacaggcacagatcattaaaccagatttaccattcattatgatatct
ggtcatggaacagttgaaactgcaattgaagccagtaaaaaaggagcttttgattttatt
tcgaaaccacctgatttaaaccgtttactgattactgtccgtaatggtttagacagggga
aatttagttaccgaaaccaaggttttaaaacgtaaagcaagtaaaacccgtgagatttta
ggcgaatcggaaagtatttctaaaattaaggaaaccattgagcgtgttgcgcctaccgaa
gcccgtgtattaattactggtgcaaatggtagcggtaaagaattggtagcccgttggtta
cacgaaaaatcgaaccgtgccgatagtcctttaattgaggtaaattgtgctgctattcca
tcagagctgattgaaagtgaattgtttggtcacgagaaaggttcatttacctctgctgtt
aagcaacgtatcggtaaatttgagctggctaatggtggaactttatttttagacgagatt
ggcgatatgagcctctctgcccaggcaaaagttttacgtgctttgcaagaacataaaatt
tcgcgtgtgggtggtgaaaaggaaattgaagtaaatgttcgcgttttagcagcaaccaat
aaagatttattgaaagaaattgaagatggtaacttccgtatggatttgtaccatcggtta
aatgtaatcaatatccatgttccacatttaacagagcgaactgatgatattcctgttatt
gcccagaactttttagaaagtatctgcagcgattatggaatgcccgttaagaaaataaac
gatggtggaatggccgccttaaaagctttgccttggacaggtaatgtacgtgagttacac
aatatgattgagcgtttgattattttaagcgataaggttattaccgaaaatgacgtgcgt
gcctttgctaatccaggtggtggtacaaatattggcgccgcaagcagtgcgcagattccg
ggtgccggtggattgagcctgtcttcttctttcgattctttcaataattttcaggattat
aaagatcacgcggaacgtgaattcatcaaattcaaactggaaaaaaacaactggaatgta
tcaaaaacagctgatgaaattgatatccaaagaagtcacttatatagtaaaattgaaaag
tttggtttaaagagagctgagtaa
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