Pedobacter riviphilus: H9N25_11415
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Entry
H9N25_11415 CDS
T08657
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
prk
Pedobacter riviphilus
Pathway
prk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H9N25_11415 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prk03400
]
H9N25_11415 (ung)
Enzymes [BR:
prk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H9N25_11415 (ung)
DNA repair and recombination proteins [BR:
prk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H9N25_11415 (ung)
Prokaryotic type
H9N25_11415 (ung)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
AD
Motif
Other DBs
NCBI-ProteinID:
QNR86939
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All DBs
Position
2782240..2782920
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AA seq
226 aa
AA seq
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MSAALEPGWLAVLEEEFEKDYMKSLKSFLQEEKNNGATVYPKGSDIFNALNTTPFNQVKV
VILGQDPYHGVGQAHGLSFSVQRGIAVPPSLKNIYKELETDIEGFKTPNHGHLTHWAEQG
VLLLNATLTVRASEAGSHQNRGWEIFTDEIIKALSQKREHIVFLLWGKYAQQKAALIDQK
KHYVLTAAHPSPFSAYNGFFGSKHFSKANQLLTQNNLTPIDWSLPA
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagcattagaaccaggttggttagccgttttagaagaagaatttgaaaaagac
tacatgaaaagccttaagtcttttttacaggaggaaaaaaacaatggagccacggtttac
ccaaaaggcagtgatattttcaatgcattaaacaccacgccatttaaccaggtaaaggtt
gtgattttaggtcaagacccctatcacggtgttggccaggcgcatggcctatccttttca
gtacaacgaggtatagccgttccgccatcgttaaaaaatatatacaaagagctggaaact
gatattgaaggttttaaaacaccaaatcatggccacttaacgcactgggcagaacaaggc
gttttgttgttaaatgccacgctaaccgttcgtgcttcagaagcaggctcgcatcaaaac
cgtggctgggaaatttttacagatgaaattattaaggctttatctcaaaaacgcgaacat
attgtatttctgttgtggggtaaatatgcacagcaaaaggctgcattaatagatcaaaag
aaacattatgtgcttacggccgcccacccttcgccattttcagcctataatggcttcttc
ggatcgaaacatttttccaaagcaaatcagcttttaacacaaaataacttaacacctatc
gactggagcttgcctgcctaa
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