Pedobacter riviphilus: H9N25_12620
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Entry
H9N25_12620 CDS
T08657
Name
(GenBank) hydroxymethylglutaryl-CoA lyase
KO
K01640
hydroxymethylglutaryl-CoA lyase [EC:
4.1.3.4
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00280
Valine, leucine and isoleucine degradation
prk00650
Butanoate metabolism
prk00907
Pinene, camphor and geraniol degradation
prk01100
Metabolic pathways
prk01120
Microbial metabolism in diverse environments
prk04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
H9N25_12620
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
H9N25_12620
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
H9N25_12620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
H9N25_12620
Enzymes [BR:
prk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.4 hydroxymethylglutaryl-CoA lyase
H9N25_12620
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Motif
Pfam:
HMGL-like
HEAT_DAAF5
DSPc
Motif
Other DBs
NCBI-ProteinID:
QNR82838
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Position
3063215..3064075
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AA seq
286 aa
AA seq
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MSQNNFKLVECPRDAMQGLHDFVPTELKVEYLNLLLQVGFDTLDFGSFVSPKAIPQMADT
AEVLAQLDLGNTNTKLLAIVANLRGVESAAKHQHINYLGFPFSISETFQQRNTNSSITQS
LSTVEEMLSLCAKNNKKALVYLSMGFGNPYGDEWNYEIVEKWADVLVSKGVEILSLADTV
GISTPEKIATILPRLISRFNGTEIGIHLHSTPVERFEKIEAAYHSGVKRIDSALKGFGGC
PMAADDLTGNIATEDVIGYLNAQGENLSLNMDKWNEAMVLSGRIFG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaacaacttcaaattagtagagtgtccacgtgatgccatgcaaggattgcac
gattttgttccaaccgaacttaaggttgagtatttgaacctcttgcttcaggtaggtttc
gatacactcgattttggaagttttgtatcaccgaaggccattccacaaatggcagataca
gctgaagttctggcgcaattggatctaggcaacacgaatactaaacttttggccattgta
gccaatttaaggggcgtagaaagcgctgcaaagcatcagcatatcaattaccttggattt
cccttttctatctctgagaccttccaacaacgtaataccaattcaagtattacacaatcg
ttaagtacggtagaagaaatgctctctctttgtgctaaaaataataaaaaagcgctcgtt
tatctctcgatgggctttggaaatccttatggtgatgaatggaattatgaaattgtagaa
aaatgggccgatgtactcgtgagtaaaggtgtagagattttgtcgttggcagataccgtt
ggcatatccacgccggaaaagatagccactatattacctagattaatttcaagatttaac
ggcacagaaatcggtattcatttacactccacacctgttgaacggttcgaaaagatagaa
gccgcttatcattctggcgtaaaacgtattgattcggctttaaaaggttttggcggctgc
cccatggccgcagatgacctcacaggtaacattgctaccgaagatgtaattggctatttg
aatgcacaaggagaaaatttaagccttaacatggataaatggaatgaggcaatggtttta
tcggggagaattttcgggtag
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