Pedobacter riviphilus: H9N25_13750
Help
Entry
H9N25_13750 CDS
T08657
Name
(GenBank) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
H9N25_13750
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
prk01007
]
H9N25_13750
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prk03016
]
H9N25_13750
Enzymes [BR:
prk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
H9N25_13750
Amino acid related enzymes [BR:
prk01007
]
Aminoacyl-tRNA synthetase
Class I (U)
H9N25_13750
Transfer RNA biogenesis [BR:
prk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
H9N25_13750
Prokaryotic type
H9N25_13750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
Val_tRNA-synt_C
tRNA-synt_1_2
DUF3144
Motif
Other DBs
NCBI-ProteinID:
QNR83038
UniProt:
A0ABX6TDJ4
LinkDB
All DBs
Position
complement(3378718..3381384)
Genome browser
AA seq
888 aa
AA seq
DB search
MSISTKYNPAETEDKWYSYWLSKKFFHSEPDEREPYTIVIPPPNVTGVLHMGHMLNNTIQ
DVLIRKARMQGKNACWVPGTDHASIATEAKVVAMLKEQGINKKDLSREEFLKYAWEWKEK
YGGIILDQLKKLGASCDWDRTRFTMEEDLSEAVIDSFIHLYKKGWIYRGIRMVNWDPAGK
TAVSDEEVIRKEVNQKLYYIKYLISGTKDEFLTIATTRPETIMADAAICINPNDERFTHL
KGKKVFVPLVNHEIPVIEDEYVDIEFGTGCLKVTPAHDLNDYELGVKHNLPVTDILNDDG
TLNELAVILVGEDRFVARKKIAKMLEEAGHLDKVEDYKSQIGFSERTDAAIEPKLSMQWF
VKMKEMAQPALDDVLNGEVNLIPNKFENTYRHWMENVRDWNISRQLWWGQRIPAWYDDKG
NWVVAKTKDEALEEFWKKKHLDESCSEAEKAGFKHQLEPFLRQDDDVMDTWFSSWLWPIS
VFDGFKNPENKDINYYYPTNDLVTAPEILFFWVARMIMAGHEFMGKKPFTNVYLTGIVRD
KLGRKMSKSLGNSPDPIGLIEKYGADAVRVGMLMSSPAGNDLMFDESYCEQGRNFASKIW
NAFRLVKGWEVDENLANPNIQAISWFENRFNEALVEIEANFKQYRLSEALMITYKLVWDD
FCAWYLEMVKPAYQQPIDAESYKATIAFFENIIKLLHPNMPFITEELWHDDLFADRGEMD
CCIVAEFPKGGAFDEQLLKDAEVIKTVVAEIRNVRNQKQISPKEALPLSIKINSDLDYEK
WLNIVFKLANVSEAEIVNDKIVGATAFMAGKDEFFIPLTENIDIEAERERLNADLVYLQG
FLKSVDAKLSNERFVQNAKPEIIANERNKKADAEAKIKIIEESLAVLG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagcatatccaccaagtacaatcctgcagaaacagaagataaatggtatagctattgg
ctatcgaagaaatttttccattccgaacccgatgaacgcgaaccttacaccattgtaatt
ccgccgccaaacgtcacaggtgtactacacatggggcatatgctcaacaataccattcag
gatgtattgatccgtaaagcccgcatgcaaggtaaaaatgcatgttgggtgccaggaaca
gaccacgcctctattgctaccgaagcaaaagttgtagcgatgttaaaagagcagggtatc
aataaaaaagacctttcgcgagaagaatttttgaaatatgcctgggagtggaaagagaaa
tacggcggtattattttagaccagttaaagaaattaggcgcaagctgcgattgggaccgt
acccgtttcaccatggaggaggatctttctgaagcggttatcgattcgtttatccactta
tataaaaaagggtggatttaccgtggtatccgtatggtaaactgggatccggctggtaaa
actgccgtttctgatgaagaagtaatccgtaaggaagtaaaccaaaaactatattacatt
aaatacctgatttcgggaacaaaagacgagtttttaacaatagctacaacgcgtccggaa
acgattatggctgatgcagcaatctgtatcaatccgaatgacgaacgttttacacattta
aaaggtaaaaaggtttttgtgcctttggttaatcacgaaattccggttattgaagatgaa
tatgttgatattgagtttggtactggttgtttaaaagttacgccggcgcacgatctgaat
gattatgagcttggtgttaagcacaatttaccagttaccgatatcttaaacgatgatgga
actttaaatgaattagcggttattttagtaggcgaagacaggtttgttgcccgtaaaaaa
attgccaaaatgttggaagaagccgggcatttagataaagttgaagattataaatcgcag
attggtttttctgaacgtaccgatgccgctatcgaaccaaaactttcgatgcagtggttt
gtaaagatgaaagaaatggcgcagcctgctttggatgatgtgctaaatggagaggtaaac
ctgattccaaataaatttgaaaacacctaccgccactggatggaaaatgttcgcgattgg
aacattagtcgtcagttatggtgggggcaaagaatcccggcctggtatgatgataaagga
aattgggtggttgccaaaaccaaagatgaagcgttagaagaattctggaagaaaaaacat
ttggatgaaagctgttcagaagctgaaaaagctggattcaaacatcaattagagccattt
ttaaggcaagatgatgatgtgatggatacctggttttcatcatggttatggccaatttcg
gttttcgacggctttaaaaatcctgaaaataaagacatcaattattattacccaaccaat
gatctggttaccgcgcctgaaattttattcttctgggtggcccgtatgattatggccggg
catgagtttatgggcaaaaagccatttacgaatgtatacttaacaggtattgtgcgtgat
aaattaggccgtaaaatgtctaaatcgttgggtaactcacctgatccgattggattgatc
gaaaaatatggtgccgatgcggtacgcgtggggatgttaatgtcgtcaccggcgggcaac
gatttaatgttcgatgaaagctactgtgaacagggacgtaatttcgccagcaaaatatgg
aatgctttccgtttggtaaaaggatgggaagttgacgaaaacctcgcaaacccgaatatc
caggccatatcgtggttcgaaaaccgctttaacgaagctttggtagaaattgaagccaac
tttaagcaatatcgcctatcagaagcattaatgatcacttataaattggtttgggatgat
ttctgtgcctggtatttagagatggttaagccggcttaccaacaaccgattgatgcagag
agttataaagcaacgattgcttttttcgaaaatatcatcaaattattgcacccgaatatg
cctttcattaccgaagagttatggcatgatgatttgtttgcggaccgtggcgaaatggat
tgttgtattgtagccgaatttccgaaaggtggcgcttttgatgagcaactactgaaagat
gcggaggtaattaaaaccgtggtagctgaaattagaaacgtacggaaccagaagcagatt
tctcctaaagaagcgttacctttaagtatcaaaataaactctgatctcgattacgaaaaa
tggttaaacattgttttcaaattagccaatgtatcagaggccgaaattgtaaacgataaa
attgttggtgcaactgcttttatggctggtaaagatgaattctttattccactaacagaa
aacattgatatagaggcagaacgcgaacgcttaaatgccgatttagtatatttacaaggc
tttttaaagtcggttgatgctaaattgagtaacgaacgctttgtacagaatgcaaaacca
gaaattattgcaaacgaacggaataaaaaagccgatgctgaagctaaaatcaaaattatt
gaagaaagcctagcggttttaggataa
DBGET
integrated database retrieval system
