Pedobacter riviphilus: H9N25_13990
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Entry
H9N25_13990 CDS
T08657
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
prk
Pedobacter riviphilus
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
AAA
AAA_2
AAA_16
HTH_8
AAA_19
AAA_7
nSTAND3
AAA_22
AAA_3
Motif
Other DBs
NCBI-ProteinID:
QNR83082
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Position
3428269..3429960
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AA seq
563 aa
AA seq
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MESKGNLAETQNQEHTIQNIDGATALEIENARLFKKLEQKERENAVLLSLSNSIASIRNK
LDLFDVIDQKLKKLFDFDDFVICLINDDQETHSAFIYNQKEDFLKTTGIAPESSKKYTLD
DGMCRAIISSEKPTVFNVEEVLMWDDAPAWLEFWYNKGIKEMIGLKMVDRSGCIGFFYLY
IKNANSLSNIYFDLLQGISLQISIAISNILANEKIELQLAEINQYKQKLEDEKTYLKEEI
QHKYNHTEIIGQSESLKSIFHLVDAVAATDSTVLIIGETGTGKELIARALHNSSLRHNEL
MVKINCAAIPASLAESELFGHEKGSFTGATERRIGKFELAHNGTLFLDEIGELSLDLQVK
LLRALQEKEIERIGGKGVIKTNVRIIAATNRNLLKEIEKGNFRSDLYYRLNVFPISIPPL
RDRLDDIPPLTTFFIERISKKTGRQVNAISKSALNKLMLYPWPGNVRELEHLIERSILLT
SGNILKEIHLPKIDRNEAINGSEEQKIKSIHENERDHILAILKHCKGKISGVGGAAEMLH
IPATTLNSKIKKFKIKREHILNR
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaagggtaatttagctgaaactcaaaatcaagaacataccatccagaatatt
gatggagcgactgcacttgaaatcgaaaatgcacgcttatttaaaaaactcgaacaaaaa
gaaagggaaaatgcagttttgttatcgttaagcaactccattgcttccatcaggaataaa
cttgatctcttcgatgtcatcgatcaaaagttaaaaaaactatttgattttgatgatttc
gtgatctgtttgattaatgatgatcaggaaacccatagtgcttttatctacaaccaaaaa
gaagatttccttaaaactacaggtatagcaccagaatcatctaagaaatatacgctcgat
gacggtatgtgcagggcgataatctcatcggaaaaaccgactgttttcaatgttgaagaa
gttttaatgtgggatgatgcacctgcctggctggaattttggtacaataaaggtattaaa
gaaatgatcgggctcaaaatggtcgacagatcgggttgtatcggtttcttttacctatat
attaaaaacgcaaactcactatcgaacatttattttgatttgcttcagggcatttcgctg
caaatctcaatagccatatcgaacatcctggccaatgaaaaaattgaattacagctggca
gaaatcaatcaatacaaacaaaaactagaagatgagaaaacttacctaaaagaagagatc
caacataaatacaaccatactgagatcatcggacaaagcgaatcgttaaaaagcattttt
cacctggtagatgccgtggcagctactgatagtacagtattgattattggagaaacagga
acaggaaaagaactcatcgcaagggccttacacaactcatcacttcgccacaatgaactg
atggttaaaatcaattgtgccgcaatccctgccagcctggctgaaagcgaactttttgga
catgaaaaaggcagctttacaggcgcaacagaacggcggatcggaaaattcgagctggcc
cataatggcacgctgtttttggatgaaattggtgagctctcgctagaccttcaggtgaaa
ctacttagggcactccaggaaaaggaaatagaacgcattggtggtaagggcgtaattaaa
acgaatgttagaattatagctgcaaccaacaggaatctgttaaaagagatagaaaaagga
aatttcagaagtgatctctattacagattaaacgtattcccaatttcaatcccgccgcta
agggatcggttggatgacatcccgccgctaacaaccttcttcattgaacgcatttccaaa
aaaaccgggcgacaggtaaacgctatttccaaaagcgccttgaacaaactgatgctctac
ccctggccaggaaatgtaagggagctggagcacctaattgagcggagcatactattaaca
tcgggcaacatattaaaagagatacacctgcctaaaatagatagaaatgaagccattaac
ggttcggaggagcaaaaaatcaaaagcatccacgaaaacgagcgagatcatatcttggca
atattaaaacattgtaagggcaaaatatccggtgtcggtggggctgccgaaatgttacac
atcccagcgactacccttaactcaaaaattaaaaaatttaaaattaaacgggagcatatc
ctgaataggtaa
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