Pedobacter riviphilus: H9N25_14175
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Entry
H9N25_14175 CDS
T08657
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
prk
Pedobacter riviphilus
Pathway
prk03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
H9N25_14175 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
prk03011
]
H9N25_14175 (rpsA)
Ribosome [BR:
prk03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
H9N25_14175 (rpsA)
Bacteria
H9N25_14175 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_2
Spt6_S1
PCB_OB
Rrp44_S1
DUF4752
SH3_2
Motif
Other DBs
NCBI-ProteinID:
QNR83117
LinkDB
All DBs
Position
3472478..3474412
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AA seq
644 aa
AA seq
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MAKKQVAEKELAAKTAELQGEGGRLTEKETIESEADSVSIESIKSSLATPSEDFDWDADE
KVFGNYNEADRKKFEDMYAGTFNQITKGEIISGIVVSINNKDVVLNVGFKSDGLVSTSEF
RDTPDLKIGDSVDVFVEAPEDANGQLILSRKRAKTQRSWEAINEALENDRIINGFVKSRT
KGGLIVDIMGVEAFLPGSQIDIKPIRDYDVYVGKTMEFKVVKINHEFKNVVVSHKVLIED
DLESQKVEIVSKLEKGQVLEGTVKNITDFGVFIDLGGVDGLLHITDISWGRIEHPKEVLS
LDEKINVVVLDFDDEKKRIALGLKQLTPHPWENLSADIQVGSKVKGKIVTVADYGAFLEI
IPGVEGLIHVSEMSWSQNLRNPQEFLKVGDEIEAEVLTLDRDERKMSLGIKQLSNDPWQE
VAAKFPVGSKHKATVKNMTNFGVFVEIEEGIDGLIHISDLSWSKKVNHPNEFTKVGDVLD
VVVLELDVDNRKLSLGHKQLEENPWDTFETIFTLDSVHQGTVVKVTDKGAVIALPYGVEG
FVPTKHMVKEDGTSVKAEETNDFKIIEFNKEAKRIVVSHARIWEEVKAEAVAEERNAKKK
EAKAAVTAVKKVKDSVEKSTLGDLDVLAQLKSQLEGEESKAKKG
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaacaagtagcagaaaaagaattagcagcaaaaacagctgaacttcaggga
gaaggcggacgtctaactgaaaaagaaactattgaatcagaagctgattcagtttcgatc
gaatcgatcaaatcatcattagcaacaccaagcgaagatttcgactgggatgcagatgaa
aaagtttttggtaactacaatgaggcagaccgtaaaaagtttgaagatatgtatgccgga
acattcaaccagatcactaaaggtgaaatcatcagcggtatcgttgtttcaatcaacaac
aaagacgtagtattaaacgtaggtttcaaatcagacggtttagtttctacttctgagttc
cgtgatacaccagatctaaaaatcggcgattcagttgacgtattcgttgaagcaccagaa
gatgctaacggtcaattgatcctttctcgcaaaagagctaaaacccaaagatcatgggaa
gcaattaacgaggctcttgaaaatgatagaatcatcaacggtttcgttaagagccgtact
aaaggtggtttaattgttgatatcatgggcgttgaggctttcttaccaggatctcaaatt
gatattaaacctatccgcgattacgatgtatacgtgggtaaaacaatggaattcaaagtt
gttaaaattaaccatgagtttaaaaacgtagttgtttctcataaagtgttaattgaagac
gatttagaaagccaaaaagtagagatcgtttctaaattagaaaaaggtcaggtacttgaa
ggtactgttaaaaacattactgatttcggtgtgttcatcgatttaggtggtgttgacggt
ttacttcacattactgatatttcttggggccgcatagagcatccgaaagaagtattatca
ttagatgaaaaaatcaacgtggttgttttagatttcgatgatgagaaaaaacgtatcgct
ttaggcttgaaacaattaactccacatccttgggagaacttaagtgccgatatccaagtt
ggttctaaagtaaaaggaaaaatcgtaactgttgcagattatggtgctttcttagaaatc
atcccaggtgttgaaggtttaatccacgtttctgaaatgagctggtcacaaaacttaaga
aatccacaagaattcttaaaagttggtgatgagatcgaagctgaagttttaactttagac
agagacgagcgcaaaatgagcttaggtattaaacaattatctaacgatccatggcaagaa
gttgcggctaaattcccagttggaagcaagcacaaagcaactgttaaaaacatgactaac
ttcggtgtttttgttgaaatcgaagaaggtattgatggtttaatccacatttctgattta
tcttggtctaaaaaagtaaaccaccctaacgaattcactaaagttggtgatgtattagac
gttgttgttttagaacttgatgttgataaccgtaaattaagcttaggtcacaaacaatta
gaagaaaacccttgggatactttcgaaacgatcttcactttagattcggttcaccaaggt
acagttgttaaagtaactgataaaggtgctgttattgctttaccttatggtgtagaaggt
ttcgtaccaactaaacacatggttaaagaagatggtacatcagttaaagctgaagaaacc
aatgacttcaaaatcattgaattcaacaaagaagcaaaacgtatcgtagtatctcacgcc
cgtatttgggaagaggttaaagctgaagctgtagcagaagaaagaaatgctaagaaaaaa
gaagctaaagctgctgtaactgcggttaaaaaagttaaagattctgtagagaaatctact
ttaggagacttagacgtattagctcaattgaaatcgcaattagaaggcgaagaaagcaaa
gctaaaaaaggctag
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