Pedobacter riviphilus: H9N25_14600
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Entry
H9N25_14600 CDS
T08657
Name
(GenBank) dCMP deaminase family protein
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00240
Pyrimidine metabolism
prk01100
Metabolic pathways
prk01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
H9N25_14600
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
prk02044
]
H9N25_14600
Enzymes [BR:
prk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
H9N25_14600
Secretion system [BR:
prk02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
H9N25_14600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC_N
NAD1
APOBEC2
XOO_2897-deam
SNAD4
APOBEC4_like
Motif
Other DBs
NCBI-ProteinID:
QNR83190
LinkDB
All DBs
Position
complement(3587358..3587816)
Genome browser
AA seq
152 aa
AA seq
DB search
MTDKPSFDSIFMNLATDLAARSHCVRAHVGAVLTKDTRIISIGYNGPPAGTHNCDEEWPE
HGCARDSKGSCSLALHAEENAILYASKNGSRIEGCTLYTTLSPCIACARLILSSGIKLVY
YSKSYAAYKGLPSDEGVDFLRKFGVEVVLIES
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaaccaagtttcgactcgatatttatgaacctggccaccgatttggctgcc
cgctcacattgtgtgcgtgcccatgtaggtgcagtgttaacaaaagatacgcgcataatt
tctatcggttacaatggtccgccggccggtacccacaactgtgacgaggaatggccagag
catggctgtgcccgcgatagtaaaggaagttgttctttggctttacatgctgaggaaaat
gccatactgtatgcctcaaaaaatggatcgaggatagaaggatgtactttatacaccacc
ttgtcgccttgtattgcctgtgcccgtttaattttatcttcaggaatcaaactggtatac
tattctaaatcttatgcagcttacaaaggtttgcctagcgacgaaggcgtagatttttta
agaaaatttggtgtcgaggtggttttgatagaatcgtag
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