KEGG   Pedobacter riviphilus: H9N25_15635
Entry
H9N25_15635       CDS       T08657                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
prk  Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:prk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:prk03032]
    H9N25_15635
   03036 Chromosome and associated proteins [BR:prk03036]
    H9N25_15635
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:prk02048]
    H9N25_15635
Enzymes [BR:prk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     H9N25_15635
DNA replication proteins [BR:prk03032]
 Prokaryotic type
  DNA Topoisomerases
   H9N25_15635
Chromosome and associated proteins [BR:prk03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    H9N25_15635
Prokaryotic defense system [BR:prk02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    H9N25_15635
SSDB
Motif
Pfam: DNA_gyraseB Toprim HATPase_c HATPase_c_3 DNA_gyraseB_C MHB
Other DBs
NCBI-ProteinID: QNR83385
LinkDB
Position
complement(3827432..3829303)
AA seq 623 aa
MAEVVYNDDSIRSLDWKEHIRLRPGMYIGKLGDGSAQDDGIYVLLKEIVDNSIDEFVMGT
GKTIEITLSEQKVNVRDYGRGIPLGKVIDCVSKINTGGKYDSNAFQKSVGLNGVGTKAVN
ALSTSFTVQSYRDGKTKKVEFSKGEIVNEQPVIDTTQRNGTAITFYPDETIFRNYHYIPD
FVESMVWNYVFLNTGLTINFNNQKYFSERGLYDLLSKFNKPEEIRYPIIHMIGPDIEIAM
THGQQYGEDYHSFVNGQHTTQGGTHQAAFRAAVVKTVREFFKKEFDAADVRSSIIAAISV
RVQEPVFESQTKTKLGSQNMGPEGPSVATFINDFVKKELDDYLHKHPDVADALLKRIIQS
ERERKDIAGIKKLANDRAKKASLHNKKLRDCKVHFNTTHEKRYETTLFITEGDSASGSIT
KSRDVDTQAVFSLKGKPLNCYELTKKVVYENEEFNLLQHALNIEDGLDGLHYNNIVIATD
ADVDGMHIRLLMMTFFLQFFPDLVKAGHVYILQTPLFRVRNKKETIYCYSDEERKNAIEK
LGNKPEITRFKGLGEISPDEFGLFIGKDIRLDPVILKDQTIKSLLEYYMGKNTPDRQQHI
IRNLRIEKDEVTEEPKVITEEVA
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggcagaagtagtttataacgacgacagtattcgttcattagattggaaagagcacatc
aggcttcgtccggggatgtacattggtaaacttggcgatggttctgctcaagacgatggt
atttatgttttgctaaaagaaattgtagataactctatcgatgagtttgtaatgggtacc
ggaaaaaccatcgaaattacgctttcggagcaaaaagtgaatgtacgcgattacggccgt
ggtataccattgggtaaggtaatcgattgtgtaagcaaaataaataccggcggtaaatat
gatagtaatgccttccaaaaatcggtaggtttaaatggtgtgggtaccaaggcagttaac
gcgctttccaccagttttaccgtacaatcgtaccgtgatggaaaaacaaaaaaggtagaa
ttctctaaaggagaaattgtaaacgaacaacccgttattgatactactcagcgtaacggt
acagccattactttttatccggatgaaaccattttcagaaactaccactacattcctgat
tttgtagagagtatggtttggaactacgtgttcttaaatactggtttaactataaatttc
aataaccagaaatatttttcggaaagaggtctatacgatttgctttctaaatttaataag
ccggaagaaattcgttacccgattatccatatgattgggccagatatcgaaattgccatg
acccatggtcaacagtatggcgaagattaccactcttttgtgaatggacaacacactaca
cagggtggaacccaccaggcggcatttagagctgcggtagtgaaaaccgttcgggagttt
ttcaaaaaagagtttgatgcagccgatgtgcgttcatctattatagcggcaatttctgtg
cgcgtacaggagcctgttttcgaatcgcagactaaaacaaaactaggctcacagaacatg
gggcctgaaggtccatcggttgctacttttattaacgattttgttaaaaaagagcttgat
gattacctgcacaaacatcctgacgttgctgatgcacttttaaaacgcattattcaatcg
gaacgggagcgtaaagatattgcaggaattaaaaaactggctaatgacagggccaaaaaa
gcttcgttacacaataaaaaactgcgagattgtaaggtgcattttaatactacgcacgag
aaacgttacgaaaccaccttatttattactgagggcgattcagcttcaggctcaatcaca
aaatcgcgtgatgtagatacccaggcggtgttcagtttaaaggggaagccgctaaattgt
tacgagctgacaaaaaaagtggtgtatgaaaatgaagagtttaacctactgcaacacgct
ttaaatatcgaagatggtttagatggcttacactataataatatcgttattgctacagat
gccgacgtggatggtatgcacatccgtttgctgatgatgactttctttcttcaatttttc
cctgatctggtaaaagcaggccatgtttatattttgcagacaccgctttttagggtgcgc
aataaaaaggaaaccatttattgctacagtgacgaagaacgtaaaaatgcaatcgaaaaa
ctgggtaataaaccagaaattacccgatttaagggtttaggagaaatttctcctgatgaa
tttgggttatttatcgggaaagatatcaggttagaccctgttattttgaaggatcaaacg
attaaaagtttgctggaatattacatgggtaaaaacacgccagacaggcaacagcacatt
atccgtaacctaagaatagagaaggatgaagtaactgaagagcctaaagtgattacggaa
gaagtagcataa

DBGET integrated database retrieval system