Pedobacter riviphilus: H9N25_15695
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Entry
H9N25_15695 CDS
T08657
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
prk03016
]
H9N25_15695 (truB)
Enzymes [BR:
prk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
H9N25_15695 (truB)
Transfer RNA biogenesis [BR:
prk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
H9N25_15695 (truB)
Prokaryotic type
H9N25_15695 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
ANM3_C2H2_Zf
Motif
Other DBs
NCBI-ProteinID:
QNR83397
LinkDB
All DBs
Position
3845996..3846727
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AA seq
243 aa
AA seq
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MSTENSKFKDFNFAEGELLLINKPYKWTSFDVVGKIRNSLKPLKLKVGHAGTLDPLATGL
LIICTGKLTKQIDTFQAEEKEYTGTMILGATTPSFDMETEVDQSFDISNITKDEIYAACK
PFIGDIEQYPPAHSAVKVNGERLYVKARLGEEVELRKRFVSVPEFEITRIELPEIDFRIV
CSKGTYIRSLISDFGKTLNSGAYLSKLTRTRSGNFLLKDAFEVLELVNYIRTKKEEAKTE
AEA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccgaaaattcaaaattcaaagacttcaattttgctgaaggcgaattgctttta
attaacaaaccatacaaatggacttcatttgatgtggtgggcaaaatccgtaattcttta
aaaccgctaaaactaaaggttggtcatgccggcactttagatccacttgctacaggcttg
ctaattatctgtacagggaaattaactaagcagatagatactttccaggctgaagagaaa
gaatataccggtactatgattttgggtgctactaccccatcattcgatatggagactgag
gtagatcaaagttttgacatcagtaatattacaaaagacgaaatttacgctgcatgtaaa
ccatttattggcgatatagaacaatatccacccgcacactctgctgtaaaggtaaatggc
gaacggttatatgtaaaagcaagattaggcgaagaagtagagctacgcaaacgttttgta
agtgttcctgaatttgaaattacccggatcgaactgccagaaatcgattttagaattgta
tgtagtaaaggcacttacatccgttcattaatatccgattttggtaaaactttaaatagc
ggggcttatctttccaaacttacccgtacccgaagcggaaactttttgttaaaagatgcg
tttgaggtattagaacttgttaattatattcgtacgaagaaagaagaagctaaaactgaa
gcagaggcatga
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