Pedobacter riviphilus: H9N25_15860
Help
Entry
H9N25_15860 CDS
T08657
Symbol
dcm
Name
(GenBank) DNA (cytosine-5-)-methyltransferase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00270
Cysteine and methionine metabolism
prk01100
Metabolic pathways
Module
prk_M00035
Methionine degradation
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
H9N25_15860 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prk03000
]
H9N25_15860 (dcm)
03032 DNA replication proteins [BR:
prk03032
]
H9N25_15860 (dcm)
03036 Chromosome and associated proteins [BR:
prk03036
]
H9N25_15860 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
prk02048
]
H9N25_15860 (dcm)
Enzymes [BR:
prk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
H9N25_15860 (dcm)
Transcription factors [BR:
prk03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
H9N25_15860 (dcm)
DNA replication proteins [BR:
prk03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
H9N25_15860 (dcm)
Chromosome and associated proteins [BR:
prk03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
H9N25_15860 (dcm)
Prokaryotic defense system [BR:
prk02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
H9N25_15860 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
NTP_transf_5
CH_2
Motif
Other DBs
NCBI-ProteinID:
QNR83424
LinkDB
All DBs
Position
complement(3891486..3892733)
Genome browser
AA seq
415 aa
AA seq
DB search
MEDKVVYKSKSKKSTKVILPQDNDLALLTHYHSTNEPIYGNALDVVEQFTHLVEEPNLDN
LYRAIQQKLFGNTSVPFPGPKEGKELFTFIDLFAGIGGFRMALQNLGGRCVFTSEWDKYS
KQTYFANYGEYPFGDITKDSTKQYIPQEFDVICGGFPCQPFSIAGVSKKISLGRLHGFAD
EKQGNLFFHIADIIEKHRPKAFFLENVKNLVSHDKKQTFKVIKETLEELGYSFDHKVIDG
KHFVPQHRERTLMVGFDKRVYGDNVKFDFSQVELPEEKQQLKTILQENVESKFTLSDKLW
NYLQEYAKKHKEKGNGFGFGLANPDGISRTISARYYKDGAEILIAQEGKNPRRLTPHEAG
ALQGYPIYPINTYDETKSLVIPVSDNQAYRQFGNSVVMPLIQAVGNQILQRLKSE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggaagataaagtagtttataaatcaaaaagtaaaaaatcgactaaagtaatccttccg
caggataatgatttggctttgttaacacactatcattcaacaaatgaacccatatatggc
aacgcgctggatgttgttgagcaatttacgcatttggtggaagaaccaaatctggataat
ctttatcgggcaattcagcaaaagctgttcggaaataccagtgttccctttcccggccca
aaagaaggaaaagagttattcacatttatagatttgtttgcaggtataggtggatttagg
atggcccttcaaaatctgggcggtcgttgtgtatttacttccgagtgggacaaatactct
aagcaaacctattttgcaaactatggcgagtatccttttggcgatatcacaaaagattct
accaaacaatatattcctcaggaatttgatgttatttgtggcggcttcccttgccagcct
ttttcaattgcaggagtctcgaaaaaaattagtttaggccggttgcatggctttgcagac
gaaaaacaaggcaatctgttttttcatattgcagacattattgaaaagcaccgcccaaaa
gcattcttcctagaaaatgtaaagaacctagtgtcacacgataagaagcaaacattcaag
gttatcaaagaaacactggaagaactcggttattcctttgatcataaagtaatcgatggg
aaacattttgttccccaacaccgtgaaagaactttaatggttggattcgataaacgtgtt
tatggcgataatgttaaattcgattttagtcaggtagaattgccggaggaaaaacaacag
ctcaaaaccattctccaggaaaatgttgaatcaaagtttaccttaagtgacaaactctgg
aattatttgcaggaatatgctaaaaagcataaagagaagggtaatggatttggatttggt
ttagctaatccagatggcattagccgtacgataagcgcaaggtattataaagatggggca
gaaatattgattgctcaggaaggaaaaaatccacgtagattaacgccacacgaggcagga
gctttacaaggttatcccatctatccgattaatacatatgacgaaacgaaaagtctcgta
attccggtgtctgacaatcaggcttacaggcagttcgggaattccgtagtaatgccactt
attcaggctgtaggaaaccaaatattacagaggttaaaatcagaataa
DBGET
integrated database retrieval system
