Pedobacter riviphilus: H9N25_15865
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Entry
H9N25_15865 CDS
T08657
Symbol
vsr
Name
(GenBank) DNA mismatch endonuclease Vsr
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prk03400
]
H9N25_15865 (vsr)
DNA repair and recombination proteins [BR:
prk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
H9N25_15865 (vsr)
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
QNR83425
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All DBs
Position
complement(3892862..3893299)
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AA seq
145 aa
AA seq
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MADVHNKETRSYNMSRIKGKNTKPEMLVRRFLHANGFRYRLHVKDLPGKPDIALPKYKTV
IFIQGCFWHGHDQCRYYVIPKTKTEWWLNKINGNKTKDSSNIESLKNAGWQVIEIWECEL
KPKQKSTTLTNLLAYLTQPVIVNII
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtacacaacaaagaaacccgctcatataacatgagccgcatcaagggcaaa
aataccaaacccgaaatgctcgtgcgccggtttctgcatgccaatggtttcagatatcgc
ctccatgttaaagatttaccaggcaagcccgatattgcgttgccaaaatacaaaactgtt
atatttatacagggctgcttctggcatggtcatgatcaatgcagatattatgtaatccca
aaaactaaaactgaatggtggctaaacaaaattaatggtaataaaactaaagatagctct
aatatcgaatcattaaaaaatgcaggttggcaggttatagagatatgggaatgtgaattg
aagcctaaacaaaaatctacaacacttactaatcttctggcctacctgactcaacctgtt
attgtcaacattatctaa
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