Pedobacter riviphilus: H9N25_16100
Help
Entry
H9N25_16100 CDS
T08657
Name
(GenBank) HlyD family efflux transporter periplasmic adaptor subunit
KO
K20345
membrane fusion protein, peptide pheromone/bacteriocin exporter
Organism
prk
Pedobacter riviphilus
Pathway
prk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H9N25_16100
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
prk02000
]
H9N25_16100
Transporters [BR:
prk02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
H9N25_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_3
HlyD_D23
Biotin_lipoyl_2
GCD14
DUF6687
Biotin_lipoyl
Motif
Other DBs
NCBI-ProteinID:
QNR83467
LinkDB
All DBs
Position
complement(3951298..3952458)
Genome browser
AA seq
386 aa
AA seq
DB search
MPFIEDANFEDNSIIFLHDTKVRTQIIYSATILFILVALAALPFIYTTVSVKGNGSLQSN
IERTELLAPVAGKITLINLTDNKKIKKGQLLLNIDPTIPETQNVILNNRSGELKNLLNDA
LLVLKLVDLSNAGQPALRTGLYAASWQQYAEQIQNALNAREQAYKIYKRYETLYNKKVVT
EAEYEQYKFNYDQALSDFNLVTKKYKTQWQTESNQYRKELKDLDSQKIQLTEQEKLYHLN
AGVSGTVQNLSGLQLGSFITANQKVGEISPDSALLAICYIKPADIGLIKAGQTVRFQIDA
FNYNQWGLLAGVVADISDDIILINQSPYFKVKCKLNQDYLKLKNGYKGQVKKGMTFNAHF
TIAKRNLYQLLYDKVDDWLNPNGAKS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgccttttatagaagatgccaatttcgaagataactccatcatttttttacacgatacc
aaggtacgaacacaaattatttattctgccacaatcctattcattcttgtggctttagct
gccttaccttttatttatacaacagtaagcgttaagggcaatggttctttgcagagtaat
atcgaaagaacagaattgctagcacctgtggcagggaaaattaccttgattaatttaacc
gataacaaaaaaataaaaaaagggcaactccttttaaatatagaccctaccatacctgaa
acacaaaatgtgattttgaataatcgttctggtgaattaaaaaatttattaaatgatgcg
ctcctcgttttaaaactggtcgacttaagcaatgcagggcaacctgcattgcgaaccggc
ctgtatgcggcaagttggcaacaatacgcagaacagattcaaaatgctttaaatgcccgc
gaacaggcctacaagatttataaaaggtatgaaacattatataacaagaaggttgttacc
gaagcagagtatgagcaatataagtttaattacgatcaggcgctttctgattttaatctg
gtgactaaaaagtacaaaacacaatggcaaacagaatctaatcaatatagaaaggaatta
aaagatctagatagtcagaaaatccagctaaccgaacaggagaaattatatcatttgaac
gcaggagtgtccggaacggtgcaaaacctatctggtttacaattgggctctttcattacg
gccaatcagaaagttggcgagatatcgcctgatagtgctttgctggccatctgttatatt
aaacctgctgatatcggtttaataaaagctggccaaacggtcaggtttcagatcgacgct
tttaactataaccaatggggcctgcttgctggtgtagtagccgacatttctgacgatatt
atattgattaaccaaagtccttattttaaagtgaagtgtaaattaaaccaggattattta
aagttaaaaaacggttataaaggccaggtaaaaaaggggatgacctttaacgcacacttt
actattgcaaaacgaaacttgtatcaattgctttatgataaagttgacgactggttaaat
ccaaatggagctaaaagctaa
DBGET
integrated database retrieval system
