Pedobacter riviphilus: H9N25_17550
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Entry
H9N25_17550 CDS
T08657
Name
(GenBank) transglycosylase domain-containing protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00550
Peptidoglycan biosynthesis
prk01100
Metabolic pathways
prk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
H9N25_17550
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
H9N25_17550
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
prk01003
]
H9N25_17550
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
prk01011
]
H9N25_17550
Enzymes [BR:
prk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
H9N25_17550
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
H9N25_17550
Glycosyltransferases [BR:
prk01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
H9N25_17550
Peptidoglycan biosynthesis and degradation proteins [BR:
prk01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
H9N25_17550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
TagH_C
Motif
Other DBs
NCBI-ProteinID:
QNR83733
LinkDB
All DBs
Position
4284557..4286776
Genome browser
AA seq
739 aa
AA seq
DB search
MNKSLSAQETKRYSLIIWKILIGGIALFAIFISMIGLGLFGALPSFRDIEHPKSNQASEI
IAEDGRPLGTYFVQNRSNVTYKDISENVINGLIATEDTRFKEHSGIDFKRTFSIIGYNLI
GKKQGASTITQQLAKNLFPRESNLNFFSLVLTKFKEWIVAVKLERNYTKEEIITMYLNTV
DFGNQAYGIKSAARVYFNTTPDKLTLTQAATLVGMQKGITMYSPTRHPERSRDRRNTVMA
MMVKSDLLTQQQFDEEKDKPLNLHFNAATVNDGIAPYFRSVLKNDIKNIFQEQSITKPDG
TPYDLDRDGLKIYTTLNYDMQVYAEEAQKEYMKILQAQFIASWKGRNPFKDKALQIEQGI
KRSDRYKSLKLEGKSEDEIKDDFNTKTEMTIFTWKGNIDTVMKPIDSVRYYKMLLRNAMM
TMDPTNGHVKAWVGGINYEHFKYDQVKMGTRQVGSTAKPFTYAVAIENGYSPCYTVPNVP
VTIEGYGEPWTPRNSGKPLPGSITLQKALAYSQNYVTAYLMKQVGPVAVSTLATKMGIPN
VPAFPSICLGTFDSSVYNMVGAYGAFANKGTYTKPIYLLRIEDKNGVVLFSQKEIPKPIM
SEEVAYVMTRMLKGVVINGTGSRLNYKYHVNAPIGAKTGTTQNNSDGWFMAITPQLVTGI
WTGCEDRAFHFISTNQGEGANTALPIFAGFIKRVYANPALKISHADFEPPKSGVSITYDC
NQYQQQEEGSSELDEKLGF
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgaataagtctctttctgcacaagaaacaaaaagatatagtttaatcatctggaaaata
ctgattgggggaatagccttatttgcgattttcatttcgatgatcggtttgggccttttt
ggtgcattaccttctttcagggatatcgaacacccgaaaagtaatcaggcttcagaaatt
attgccgaagatggtcgtccgctaggaacttattttgttcagaacagatcgaatgttact
tataaagatatttccgaaaatgtaattaacggcttaattgcaacagaagatacccgtttt
aaagagcactccggtatagattttaaacgtactttttctattatcggctacaatttaatt
ggcaaaaaacaaggggcaagtaccattacccaacaattggctaaaaatcttttcccgagg
gaatcgaatcttaatttcttctcgttggtgctaaccaagtttaaagagtggattgttgcg
gttaaattagaacgcaattacaccaaggaggaaattattaccatgtatttaaatacggtc
gattttggtaaccaggcttatggtattaaatcggcagcaagggtttatttcaataccact
cccgataaattaactttaacacaggcagcaaccttagtgggtatgcaaaaagggattacc
atgtattcgccaacacgccaccctgagcgatccagagaccgtagaaatacggtaatggcc
atgatggttaaatctgatcttttaactcagcaacaatttgatgaagaaaaagacaaacct
ttaaacctgcactttaatgccgcaaccgttaacgatggtattgcaccatatttccgttcg
gtgttgaaaaatgatatcaaaaatatttttcaggagcaatcgattaccaaacctgatggt
acaccttacgatttagaccgagatggtttgaaaatttataccactttgaattatgacatg
caggtatatgcagaagaggcacaaaaggaatacatgaagattctacaggcgcagtttatt
gccagctggaaaggcagaaatcctttcaaggacaaagctttacagattgaacagggcatt
aaacgatcagaccgttataaatcgttaaaactggaaggtaaatcggaggatgaaattaag
gacgattttaacaccaaaaccgaaatgaccatttttacctggaaaggtaatattgataca
gtaatgaagccgattgactctgttcgttactacaaaatgttgttgcgcaatgccatgatg
acgatggatccaacaaacggacatgtgaaagcatgggttggggggattaattatgagcat
tttaaatacgaccaggttaaaatgggaaccaggcaggtaggatctacagcaaaaccattt
acctatgccgtagccattgaaaatggttattcgccatgttacaccgtaccaaatgtaccc
gtaacgatagaaggttatggcgaaccatggacgcctagaaattctggtaaaccattacca
ggaagcattaccttacaaaaagcccttgcttactctcaaaattatgttaccgcctattta
atgaaacaggttggtccggttgccgtatctactttagctaccaaaatgggcatacctaat
gttccggcatttccatctatttgtttgggaacattcgattcatcggtttataatatggtg
ggtgcttatggtgctttcgcgaataaaggaacttacaccaaaccgatttatttattgaga
attgaagataaaaatggcgtagtattgttttctcaaaaggaaataccgaaaccaattatg
agtgaagaagttgcatatgtaatgaccagaatgctaaagggagtagtaatcaacggaacc
ggatcgagattgaattataaataccatgtaaatgcaccgataggtgccaaaacaggaacc
actcaaaataactcagatggttggtttatggccattacgccacagttagtaacaggtatc
tggactggttgcgaagatagggcattccactttatcagtactaaccagggtgagggtgcc
aataccgcgctaccaatttttgcaggttttatcaaaagggtatatgccaatccagcttta
aagattagtcatgcggattttgagccgccaaaatctggtgtttcgattacctatgattgt
aaccaataccaacaacaggaagaaggcagcagcgaactggatgagaagctagggttttaa
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