Pedobacter riviphilus: H9N25_18335
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Entry
H9N25_18335 CDS
T08657
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
prk
Pedobacter riviphilus
Pathway
prk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
H9N25_18335 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prk03400
]
H9N25_18335 (ruvA)
DNA repair and recombination proteins [BR:
prk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
H9N25_18335 (ruvA)
RecFOR pathway proteins
H9N25_18335 (ruvA)
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Gene cluster
GFIT
Motif
Pfam:
RuvA_N
HHH_5
RuvA_C
WIYLD
RecR_HhH
HHH_3
PDDEXK_10
Motif
Other DBs
NCBI-ProteinID:
QNR83873
UniProt:
A0ABX6TEF4
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All DBs
Position
complement(4475003..4475587)
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AA seq
194 aa
AA seq
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MYAYIDGRLTFKNPAYVVVEAGGIGYHINISLNTYSALGDAERCKLYTWLHVKEDAHTLY
GFADEGERRLFLHLISVSGIGPNTGRMILSSITPIEIQTAIVKADLPLIQRIKGLGAKTA
QRLVLELQDKLKKEGADSLISMPQHNTVKDEALSALVMLGFAKQTAEKTIDQILKVTEGN
LSVEHLIKQALKTL
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcctatattgatggtagattgacattcaaaaacccagcttacgttgtggttgaa
gccggaggtataggctatcatataaacatttctttaaatacatacagcgctttaggcgat
gcagaaaggtgcaaattatatacctggctgcatgtaaaagaagatgcacatacattatac
ggcttcgctgatgaaggcgaacgccgtttatttttacatttaatttcggtatcgggtatc
ggaccgaatacaggcaggatgattttatcgtccattactcctattgagattcaaactgca
attgttaaggcagatttgccgctcattcaacggattaagggtttgggtgcaaaaaccgca
caacgcctggttttagaactacaggataaattaaaaaaagaaggggcagattcattaatt
tctatgcctcaacacaatactgttaaagatgaagcgttatcagcattggtaatgctcgga
ttcgccaaacaaaccgccgaaaaaactatagaccagattttaaaagtgacagagggaaac
ctttcggtagagcatttaattaaacaagctttgaaaactttatag
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