Pedobacter riviphilus: H9N25_19130
Help
Entry
H9N25_19130 CDS
T08657
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prk03000
]
H9N25_19130
Transcription factors [BR:
prk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
H9N25_19130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_Tnp_ISL3
HTH_23
HTH_24
HTH_7
HTH_3
HTH_38
MarR_2
Sigma70_r4
HTH_IclR
HTH_10
Sigma54_DBD
Sigma70_r4_2
Crp
MarR
HTH_5
HTH_AraC
HTH_Crp_2
HTH_AsnC-type
HTH_29
HTH_50
HTH_11
HTH_28
Phage_terminase
HTH_36
Xre-like-HTH
HTH_31
SAP
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QNR84015
LinkDB
All DBs
Position
complement(4649709..4650725)
Genome browser
AA seq
338 aa
AA seq
DB search
MRFETSTIKDIAKALGLSTSTVSRALRDRYEISEETKKLVLAYAEKVNYRANPIARSLKE
RRSYSIGIIASEIANNFFSQVINGIESIAYDKDYHVIISQSHESYKQEKLNVEHLASRSI
DGLLIALSSETQDIDYLRDLYAKGLPIVFFDRVPEDFETHKVIANNFKGSFDATEHLILS
GKRTIAHLTNSENLSITKERLKGYKAALVKYHIEFRPELVKYCQHGGMHSAELEEAVKEL
LPLKPDGIFISSDRLTTGCIMALKKTNPEVAHKIAIAGFTNSNLVELFSPSLTSVKQPAF
EMGQVATELLISMIEAKRPVTEFETKVLDTELVKMAKQ
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgaaacatctaccataaaagatattgctaaagcattgggactatctacctct
acggtttcccgtgccttaagagatcgttacgaaattagtgaagaaacaaaaaagctggtt
ttagcctatgctgaaaaggtaaattatcgtgccaatccgattgccagaagtttaaaggag
cgccgtagctattctatcggcattattgcaagtgaaattgcgaataactttttttcacag
gttataaatggcattgaatcaattgcttacgataaagattatcatgttattatttctcaa
agccacgagtcgtataagcaggaaaagctaaacgtagaacacttggcatcgcgttctatt
gatggtttattaattgcgctttcttcagaaacacaggatatcgattatttaagagattta
tatgccaagggcttaccaattgtgttttttgatcgggtgcccgaagattttgaaacccat
aaagtaattgccaataactttaagggttcttttgatgctacagaacatcttattttatca
ggaaaaagaaccattgcccatttaacgaattccgaaaacctttcgataacgaaagaaagg
ttaaaaggttataaagcggctttggttaaatatcatatcgaatttagacccgaactggtg
aaatattgccagcatggcggtatgcacagcgcagaacttgaagaagcggtgaaagaactt
ttgccgcttaagcccgatgggatttttatctcgagcgaccgcttaaccacaggctgtatt
atggccctaaagaaaaccaatcctgaagtggcacataaaattgcgatagcgggttttacc
aattctaatctagtcgaactgttttcgccatccttaacctcagttaaacagcctgcattc
gaaatgggacaggtggccacagaattattgatttcgatgatcgaggctaaaaggcctgta
actgagtttgaaaccaaggttttggatacggaactggttaagatggcaaagcagtaa
DBGET
integrated database retrieval system
