Pedobacter riviphilus: H9N25_20470
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Entry
H9N25_20470 CDS
T08657
Name
(GenBank) bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00061
Fatty acid biosynthesis
prk00540
Lipopolysaccharide biosynthesis
prk01100
Metabolic pathways
prk01212
Fatty acid metabolism
Module
prk_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
H9N25_20470
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
H9N25_20470
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
prk01005
]
H9N25_20470
01004 Lipid biosynthesis proteins [BR:
prk01004
]
H9N25_20470
Enzymes [BR:
prk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
H9N25_20470
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
H9N25_20470
Lipopolysaccharide biosynthesis proteins [BR:
prk01005
]
Lipid A
H9N25_20470
Lipid biosynthesis proteins [BR:
prk01004
]
Fatty acid synthase
Component type
H9N25_20470
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
MaoC_dehydratas
Motif
Other DBs
NCBI-ProteinID:
QNR84257
LinkDB
All DBs
Position
complement(4978748..4980160)
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AA seq
470 aa
AA seq
DB search
MNVRQKTIKQEISASGVGLHTGANVTLTFCPAPENHGFKFQRIDLDGHPIIEADADNVTD
TSRGTTLTQNGASVSTVEHVMASLVGMDLDNVLIKLDGPETPIMDGSSIQFVDLLEEVGT
VEQNADREYFTIPHNITYTEEDRKVEIVAMPLDDYRFTCMIDYNSPVLGSQHAGINTIAE
FKKEIASCRTFCFLHELEYQLSHNLIKGGDLNNAIVIVDKEVTKDELSHLAKLFNRKDID
VAPQGILNNMELRYQNEPARHKLLDMIGDLALVGMHLKGHIMAARPGHAANVAFAKKIKA
AIKKEKNKKIQKVYDPNAKPLFDVVKIMEILPHRQPFLFVDKILELSKNHVVGVKNVTMN
EEFFKGHFPGAPVFPGVLQIEAMAQVGGILVLCTVPDPENYLTYFLKIDNVRFRAQVLPG
DTIVFRCDLLEPIRRGIAQMKGVGMVGEKIVVEAEMMAQISKVKQAEPAQ
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttagacaaaaaacgattaaacaagaaatatcagcatctggtgttggtttacac
acaggcgctaatgttactttaacattttgcccggcccccgaaaatcatggctttaaattt
cagcgtattgatttagacggccaccccattattgaagccgatgcagataacgttaccgat
acctcacgaggcaccacgcttacccaaaatggtgctagtgtaagtactgtagaacatgta
atggcatcgctggttggtatggatctggataacgtactcattaaattagacggcccagaa
acgccaattatggacggaagctccatccagtttgtggatttactggaagaagtaggtaca
gttgagcaaaatgcagatcgcgagtatttcaccattccgcataacattacctacaccgaa
gaagatagaaaagtggaaattgtggccatgccgttagacgactatcgttttacgtgtatg
atcgattataactctcctgttctgggcagccaacacgcaggcattaataccattgcagag
tttaagaaagaaattgcttcttgccgtactttctgttttcttcacgaactggaataccag
ttatcgcacaatttaattaaaggcggcgatttaaataacgccattgtaattgtagataaa
gaggttacgaaggatgaattaagccacctggctaaattatttaaccgtaaggacattgat
gttgccccacaggggattttgaacaacatggaactgcgttatcaaaacgagccagcccgt
cataaattattagatatgattggcgacttggctttggtaggcatgcatttaaaaggccat
attatggctgcccgccctggccacgctgcaaacgttgcctttgcaaaaaagattaaagca
gccatcaaaaaagagaaaaacaaaaaaatacaaaaggtatacgatccaaatgcaaaacca
ttatttgatgtagttaaaataatggagattttgccacaccgtcagccatttttatttgtt
gataagatactggaactctctaaaaaccatgtggtaggcgttaaaaacgtaaccatgaac
gaagagttttttaaaggccactttcctggtgcgccggtatttccgggtgtattgcagatt
gaggctatggcacaggttggcggaatccttgtcctgtgtaccgtgcccgaccctgaaaat
taccttacttatttcctaaaaatagataacgtacgctttagagcccaggttcttcctggc
gatactattgttttccgttgcgatttacttgaacccatcagaaggggcattgcccagatg
aaaggtgtgggtatggttggcgaaaaaatcgttgtcgaagccgaaatgatggctcaaatt
tcaaaagttaaacaagcagaacccgctcaataa
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