KEGG   Pedobacter riviphilus: H9N25_20600
Entry
H9N25_20600       CDS       T08657                                 
Name
(GenBank) glutamate--tRNA ligase
  KO
K01885  glutamyl-tRNA synthetase [EC:6.1.1.17]
Organism
prk  Pedobacter riviphilus
Pathway
prk00860  Porphyrin metabolism
prk00970  Aminoacyl-tRNA biosynthesis
prk01100  Metabolic pathways
prk01110  Biosynthesis of secondary metabolites
prk01120  Microbial metabolism in diverse environments
prk01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:prk00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    H9N25_20600
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    H9N25_20600
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:prk01007]
    H9N25_20600
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:prk03016]
    H9N25_20600
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:prk02048]
    H9N25_20600
Enzymes [BR:prk01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.17  glutamate---tRNA ligase
     H9N25_20600
Amino acid related enzymes [BR:prk01007]
 Aminoacyl-tRNA synthetase
  Class I (A)
   H9N25_20600
Transfer RNA biogenesis [BR:prk03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    H9N25_20600
 Prokaryotic type
   Other AARSs
    H9N25_20600
Prokaryotic defense system [BR:prk02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    H9N25_20600
SSDB
Motif
Pfam: tRNA-synt_1c Anticodon_2
Other DBs
NCBI-ProteinID: QNR84282
LinkDB
Position
5005451..5006959
AA seq 502 aa
MDKKVRVRFAPSPTGGLHLGGVRTALFNYLFAKRNNGTFVLRVEDTDQNRFVEGAEQYIV
NCLDWCGITPDESPNNPGAYGPYRQSERKASYRKFAEQLISDGYAYYAFDTPEELDAKRK
EIPNFQYGQATRMQMRNSLTLTVSEVEELLATQTPHVIRIKVPADEIVHFNDLIRGDVSF
ETSLVDDKVLLKADGMPTYHLAVVVDDKAMEISHAFRGEEWLPSAPVHILLWKYLGWEAE
MPAWAHLPLILKPDGHGKLSKRDGDRLGFPVYAMNWTDPKTGDITKGFKEMGFMPEAFIN
MLALLGWNDGTDQELFSLKELEEKFSIERISKAGAKFDFEKAKWYNHEWIKHSSFDRLHL
AVKAELEKAGIEVKDQVFLGTIIDLIKDRCTLLPDFVAQSSYFFNSPAEYDINSVKPKWT
AEKADFFNAFADSLTLTDAGTAEAAFKALAEEKGFKPGELMLPFRIMLVGGKFGPGVFDI
AVLLGIAETKARIAKAIAVFNN
NT seq 1509 nt   +upstreamnt  +downstreamnt
atggataaaaaagttagagtaagatttgccccaagcccaaccggaggtttgcatttaggt
ggtgtgcgcactgccttgttcaattatttgtttgcgaaaagaaataatggaacttttgta
cttcgcgtagaagataccgatcaaaaccgctttgtagaaggcgcagaacaatatattgtg
aactgtttagattggtgcggtattacgccggatgaaagccctaataacccgggtgcttat
ggtccgtatcgtcaaagcgaacgcaaagcaagttatcgtaaatttgccgaacagttaatt
agtgatggttatgcttattacgctttcgatacaccagaagaattggatgccaagcgtaaa
gaaattccaaattttcaatacgggcaagctacacggatgcagatgcgcaactctttaacc
cttaccgttagtgaggttgaagagttattggcgacccaaacaccacatgttatccgcatt
aaagtaccagccgatgaaattgtgcattttaacgatttaatccgcggcgatgtaagtttc
gaaacctcgttggttgatgataaagtattattaaaggctgatggaatgccaacctaccat
ttagccgttgtggttgacgataaggcaatggaaattagtcatgcttttaggggagaagag
tggttgccttctgcgcctgttcatattttactttggaagtatttaggctgggaagcggag
atgcctgcatgggcacacttacctttaatcttaaagccagatggacatggaaaattaagt
aaacgtgatggcgaccgattaggtttcccggtttatgccatgaactggaccgatcctaaa
accggagatataaccaagggttttaaagaaatgggttttatgcccgaagcttttatcaat
atgctggcccttttaggctggaatgatggtactgaccaggagttattctcgttaaaagaa
ctggaagaaaaattctcgatagaaagaattagtaaggccggggctaaattcgattttgaa
aaggcaaaatggtataatcacgaatggattaaacactcttcatttgaccgtttacatttg
gcagttaaagccgagctcgaaaaagcaggaattgaagttaaggatcaagtgtttctaggt
acaattatcgatttaattaaagatcgctgtacattattgcctgattttgtggcacagagc
agttacttttttaattcaccggcagagtatgatataaactcggtaaaaccaaaatggaca
gcagaaaaagctgatttctttaatgcttttgctgatagtttaacattaactgatgcgggt
actgctgaagcagcttttaaagctttggccgaagaaaaaggctttaaaccaggcgaattg
atgttgccatttcgcattatgctggtaggcggtaaatttggtccgggtgttttcgatatt
gctgtattgttgggcatagcagaaactaaagcaaggatagcaaaagcaattgctgttttt
aataactag

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