Pedobacter riviphilus: H9N25_20900
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Entry
H9N25_20900 CDS
T08657
Name
(GenBank) LacI family DNA-binding transcriptional regulator
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
prk03000
]
H9N25_20900
Transcription factors [BR:
prk03000
]
Prokaryotic type
Helix-turn-helix
LacI family
H9N25_20900
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_3
IF2_N
HTH_23
HTH_7
HTH_5
DUF1198
HTH_24
HTH_38
Sigma70_r4_2
HTH_11
MarR
HTH_Crp_2
Crp
Motif
Other DBs
NCBI-ProteinID:
QNR84337
LinkDB
All DBs
Position
complement(5072806..5073825)
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AA seq
339 aa
AA seq
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MKKKTTIYDIAKALNITVSTVSRALSGFPAISDATRKAVVEMAKKLNYSPNKLASALKSG
KTHIIGVIVPSVQAHFFASIIHCIEDGLKDSGYRVIIYQSNESVENEINGVRTLLEAQVD
GIMASMSLETEDVSHFDEIIKQNKPLILFDRVNTDLKVPTITLDDFKAGYIATKHLIDQG
YQKIAFVTTVHQIKIFNDRLEGYKAALADHNLPLIEEHIIFGGLSIKDGRFGAGKLMRSK
NKPDAIIAGDDFTALGVIKKLKEIDETPPEVGVIGFANEAFSAYITPNLSTIDQHASQMG
QECAKMFLKMINQENPYANMEHIVLDPAVVERESTNKKS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagaaaaccaccatatacgatatagcgaaggcgctaaacattacagtatcaact
gtttcgagggcacttagtggcttccccgcaataagcgatgccaccagaaaggccgttgta
gaaatggctaaaaaattaaattatagcccaaataaactcgcatctgcattaaaatctggt
aaaacccatatcattggtgtaattgtaccaagtgtacaggcacatttctttgcatctatt
atccattgtatagaagatggcctgaaggatagcggctaccgtgttattatctaccaatcc
aacgaatctgttgaaaatgaaataaatggcgtaagaaccttactagaagcacaggtagat
ggcattatggcttcaatgtcgttagaaacagaagatgtttcgcactttgacgaaattatt
aagcaaaataagcccctgatattattcgaccgcgtaaatacagatttaaaagttcctacc
attacacttgatgattttaaggcaggttatattgctacgaaacatttaatagatcagggc
tatcaaaaaattgcattcgtaaccactgttcaccagattaaaatatttaatgatcgctta
gaaggatacaaagcagctttagcagaccataaccttccactaatagaagagcatattatt
tttggaggtttatccattaaagacggccggtttggtgcaggtaaattaatgcgtagcaaa
aataaacccgatgctattattgccggagatgattttaccgcgctgggtgtaattaaaaag
ttaaaagagattgatgaaacacctcctgaagttggtgtaattggctttgccaatgaagca
ttctcggcttacattacacctaacctatcaacaattgatcaacatgcatcacaaatgggc
caagaatgtgctaaaatgtttctgaaaatgattaatcaggaaaacccatatgccaatatg
gagcatattgtgcttgacccagctgttgtagaaagagaatcgaccaataaaaagagttaa
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