Pedobacter riviphilus: H9N25_21635
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Entry
H9N25_21635 CDS
T08657
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prk03019
]
H9N25_21635
03009 Ribosome biogenesis [BR:
prk03009
]
H9N25_21635
Messenger RNA biogenesis [BR:
prk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H9N25_21635
Ribosome biogenesis [BR:
prk03009
]
Prokaryotic type
rRNA processing factors
H9N25_21635
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
PoNi_N
S1
DUF6305
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QNR84473
LinkDB
All DBs
Position
complement(5245659..5247209)
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AA seq
516 aa
AA seq
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MVKELIINSTPAGVTIALIEDKQLVELHKEQINTNYAVGDIYLGRIKKIMPGLNAAFVDV
GYEKDAFLHYFDLGPQVQSLIKLTKIKRNGSVTGTLLDNLKLEADINKAGKISDVLSKNM
LLPVQIAKEPISTKGPRLSSDISIAGRYVVLVPFSNTISVSKKIKSNTERNRLKKIIESI
KPQNFGVIIRTVSEGRGVAEMQKDLLDLIAKWENFIKKVPSTEPSKRVWGEMDRSSTLIR
DILNPDFTNVYVSTPELYDDIRSYVHDISPEMEKIVKLYKQKEPIFDHFGVEKQIKNAFG
KTVNLPGGAYLVVEHTEALHVIDVNSGNRTASKENQEENALQVNKEAAKEIARQLRLRDM
GGIVVIDFIDMHKPTNRKILFDYLRELMLLDRAKHTILPPSKFGLVQITRQRVRPEMNIV
TVEKCPACDGTGEIKASIVLMDDIENNLNYILREQNEKGVTLCVHPYIEAYITKGIFNLQ
RRWFFKYGQWIKVKAQSSYYLTEFHFISAKDEEIKL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
ttggtaaaagaattaattatcaattcgactcctgccggagttaccatagcgttgattgaa
gacaaacaacttgttgagcttcacaaagaacaaatcaatactaactacgccgtaggcgat
atttatttaggccgcattaaaaaaattatgcctggactgaatgctgctttcgtggatgtt
ggttatgaaaaagatgcttttttgcattactttgatttgggccctcaggtgcaatcttta
attaagctaacgaagatcaagcgtaatggctcggttacaggcacattattagataattta
aagctagaagccgatattaataaggcaggcaaaatttctgatgtgctgagtaaaaacatg
ctcctacctgtacaaattgctaaagaaccaatttctacaaaaggtccgcgtttaagttcc
gacatttcgattgccggcaggtatgtggtactggtgccattctccaataccatatctgta
tcaaaaaaaattaaaagtaataccgaacgtaatcgtttaaaaaagattattgaaagtatt
aaacctcaaaattttggggttattatcagaaccgtttctgaaggccgaggggttgccgaa
atgcaaaaagatcttttagatttaattgctaagtgggaaaacttcattaaaaaagtgcca
tctaccgagccttcaaaaagagtttggggagaaatggacagatcatcaacgttaatccgt
gatattctgaaccctgattttacaaacgtttacgtaagtacaccagagctgtacgatgat
atccgttcttatgttcacgatatttctcctgaaatggaaaaaatcgttaaactgtacaaa
cagaaagaacccatcttcgatcattttggtgtagaaaagcagattaaaaatgctttcgga
aaaacagtaaacttaccaggtggtgcttaccttgttgtagagcatactgaagcactccac
gtgatagacgtgaacagtggaaaccgtactgccagtaaagaaaatcaagaagagaatgct
ttacaggtaaacaaagaggcggctaaagaaattgcccgtcaactgcgcttgcgcgatatg
ggcggtattgtggtaatcgattttatcgatatgcacaaaccaacaaaccgtaaaatacta
ttcgattatttgcgtgagctgatgttattggatagagccaaacacactattttgcctcca
agcaaatttggtttggtacaaattaccagacaacgtgttcgtccggaaatgaatattgtt
acggtagaaaaatgcccggcctgcgatgggaccggagaaattaaagcgagtatcgtttta
atggatgatattgagaacaaccttaattatatcttaagagagcagaatgaaaaaggcgta
acactttgcgtacacccatacatcgaagcttacattacaaaaggcattttcaaccttcaa
cgccgctggttctttaaatatggccaatggattaaagttaaggcacaatcatcatattat
ttaaccgagtttcacttcatctctgcaaaagatgaagagattaaattataa
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