Pedobacter riviphilus: H9N25_21645
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Entry
H9N25_21645 CDS
T08657
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
prk
Pedobacter riviphilus
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prk03032
]
H9N25_21645
03036 Chromosome and associated proteins [BR:
prk03036
]
H9N25_21645
03400 DNA repair and recombination proteins [BR:
prk03400
]
H9N25_21645
DNA replication proteins [BR:
prk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H9N25_21645
Chromosome and associated proteins [BR:
prk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H9N25_21645
DNA repair and recombination proteins [BR:
prk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H9N25_21645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QNR84475
LinkDB
All DBs
Position
complement(5248376..5248678)
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADIISEISTKTGIEKVDVQETVEAFFKVIKTSMIGGENVYVRGFGSFVVKKRAQKTA
RNISKNTAIIIPEHFVPSFKPAKVFVDKVKSNSKKINVEA
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgactaaggcagatattatttcagaaatatcaacaaaaaccggaattgagaaggttgat
gtacaggaaacagttgaggcatttttcaaggttatcaaaaccagcatgattggcggtgaa
aatgtatacgttagaggcttcggaagctttgttgttaaaaagagagcgcaaaaaactgcg
agaaatatctcaaaaaacactgcaataattatcccagaacacttcgtacctagctttaaa
ccagcaaaagtatttgttgataaagtgaaaagtaattcaaaaaaaattaacgtagaagcc
taa
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