Pedobacter riviphilus: H9N25_21950
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Entry
H9N25_21950 CDS
T08657
Name
(GenBank) DEAD/DEAH box helicase
Organism
prk
Pedobacter riviphilus
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
QNR84532
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All DBs
Position
complement(5317856..5320747)
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AA seq
963 aa
AA seq
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MLRVDSSKACKVVYSLCKHEYLGYLIEPHVVQLNPQGDFSFTYQRIFTHTAEEFDACLSD
IDYKLIKILDDIEQDSLIKKYYKKLIRPTEFFTKIFDNKFYENVRPKIEKKLAEALELLK
VKNELYVMDKDGWPVERKIELAEEPASILFHFRRNETETRYFPTIKYQNLRIEFMFKEAQ
IISNKPAWLLLNDVLYFFDQDIEGKKLQPFLNKRFIAIPKTTEATYFEKFVAPLIEKHHV
YAEGFEIRTEQFEAIPVIKVLYVDGGLSQIQLYFKYGEYTFPVENAHKVTVRLEKTADNY
IFHRIKRSAEWEKKQFNLLLSLGLKKTSSLFSNLEVISADENPSYAAINWVNEHIELLEA
AGYEIEQATGQKKFVFGASKIDLEVKEGNDWFDIHAVVWFGKYQIPFLSLKQHILHKKRE
FLLPDGEVAIIPDKWFTQYGSLFSLAEAGKTLKLKKHHIGLINDLAEDSLANVTLERKLQ
RLSDFEDIADTQMPVHFKGSLRDYQKAGYNWFSFLREYNFGGCLADDMGLGKTIQTLAML
QKVKEDDQLLETQTTSLIIMPTSLIYNWLTEAKKFTPKLKILAHTGTNRNKDVANFANYD
IIITTYGVTRVDVDELKNFYFNYIILDESQNIKNPASKSFKAVRSLKSKHKLILSGTPVE
NSVSDLWSQLTFLNPGLLGTQAFFYEEYVQAIEKKKDEEKARKLQSIIKPFVLRRTKEQV
AAELPPKTEQVIYCDMSEDQAAYYEKTKSAYRNDLLQSMDDGTFAQKQVQLLQGLTALRQ
LANHPVMIDGTYVSDSGKFENVIHTLDNVLKGGHKVLVFSQFVKHLDIFKKHFEEENIPF
AYLDGATRNRGEIVSEFQQNTELKVFLISIKAGGVGLNLTQADYVFILDPWWNPAVEQQA
IDRTHRIGQDKKVFIYKFIAKDTVEEKILALQNRKKSLANALITTEESFFKSLSKEDIRD
ILN
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgttacgtgtcgatagttcaaaagcctgtaaagtagtgtactctttgtgcaagcatgag
tacctgggctatttaattgagcctcacgttgttcagctcaacccacagggtgatttttct
tttacttaccaacggatttttacgcataccgcagaagaatttgatgcctgtttaagtgat
attgattataagctgatcaagattttagacgacattgagcaagactcgctgattaaaaaa
tattataaaaaactaatcaggccaactgagtttttcaccaaaattttcgacaataaattt
tacgaaaatgttcgtcctaaaatcgagaaaaaacttgcagaagctttagagcttttaaag
gtaaaaaacgaactttatgtgatggataaagatggctggcctgtagagcgcaaaatcgaa
ctggctgaagagcccgcatctatcctttttcatttcagaaggaacgaaactgaaacacgt
tattttcctaccatcaaatatcagaacctgcgcatcgaatttatgtttaaagaagcgcaa
attatcagcaacaaacctgcctggttactgcttaacgatgtattatacttttttgatcag
gatattgaaggaaaaaaactgcagccctttttaaataaacgttttattgccatacccaaa
acaactgaagccacttatttcgaaaagtttgttgcccctttaatagagaaacaccatgtg
tatgccgaaggtttcgaaattagaaccgaacaatttgaagctatacccgtaattaaagtg
ctgtatgtggatggcggactttctcagattcagttgtactttaaatacggcgaatacact
ttccctgtagaaaacgcacataaagtaactgtacgtttagaaaaaacagccgataattat
attttccaccgcatcaaacgttctgcagagtgggagaaaaaacagttcaatttactgtta
tcattagggctaaaaaaaacgagttctttattcagcaacctggaagtaatttcagctgat
gaaaacccaagctatgcggcaattaattgggtaaatgaacacattgaacttttagaagcg
gcaggttacgaaattgaacaggcgacgggccagaaaaaattcgttttcggtgccagtaaa
atagatcttgaagttaaagaaggaaacgattggttcgatatccatgccgtagtatggttc
gggaaataccagattccttttctttcactaaagcaacatattctacacaaaaagcgcgag
tttttattgcctgatggcgaagtggccattattcccgataaatggtttacgcaatatggc
agtttgttcagtttggcggaggccggaaaaacgctaaaattaaagaaacaccatatcggt
ctcattaacgatttggccgaagacagcctggctaatgttacgcttgagcgcaagttacag
cgattatcagactttgaggatatcgccgatactcagatgcctgttcattttaaaggcagt
ttacgcgattaccagaaagccggttataactggttcagctttttacgcgaatacaatttc
ggcggttgcttagccgacgatatgggtttgggtaaaaccatccaaacattggccatgctt
caaaaggtgaaagaagatgaccaattgcttgaaacgcagacaacctcgctgatcatcatg
cctacctctttaatttacaactggttaacggaggctaaaaagtttacaccaaagctcaaa
atactggcacatacaggtaccaaccgaaataaagatgttgccaattttgccaattacgat
attatcattaccacttatggcgtaaccagggtagatgtagatgaactgaaaaacttttat
ttcaattacattattctggatgaaagtcagaacattaaaaaccctgcttccaaatcgttc
aaagccgttagaagcttaaaatcgaaacacaaactgatcttgagcggtacacctgtagaa
aattcggtgagtgatttatggtcacagttaacttttttaaaccctggtttattaggtacg
caagcatttttctatgaagaatacgtgcaagcgatagaaaagaaaaaagacgaagaaaaa
gcgcgtaaacttcaatctattatcaagccctttgtactccgtagaacaaaagagcaagtg
gcggcagaattaccacctaaaacggaacaggtaatatattgcgacatgagtgaagatcag
gccgcttattacgaaaaaacaaaatcggcctaccgcaacgatttattgcaaagcatggac
gatggaactttcgcacagaaacaagtgcagctcttacaaggattaaccgctttacgccaa
ctagccaaccatcccgtaatgattgatggcacctatgtttcagattctggaaagttcgaa
aacgtcattcatacactggataatgtacttaaaggagggcataaggttttggtattttct
cagtttgtaaaacacctggatatctttaaaaaacattttgaagaggagaatattccattt
gcttatttggatggtgcaacccgtaaccgcggcgagatcgtttctgaatttcagcagaat
accgagctgaaggttttcttaatctcaataaaagctggtggtgtgggtttaaacctaacc
caggccgactatgtttttatcctcgacccttggtggaaccctgcggtagagcaacaagct
attgatagaacacaccgcattggtcaggataaaaaggttttcatctataaatttattgca
aaagacactgttgaagagaaaatattggctttacaaaaccgtaaaaaatcgctcgcaaac
gctctaattacaactgaagaaagtttctttaaatcgttaagcaaagaagatatacgcgat
atattaaattag
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