Pedobacter riviphilus: H9N25_24185
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Entry
H9N25_24185 CDS
T08657
Name
(GenBank) 3-deoxy-D-manno-octulosonic acid transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
prk
Pedobacter riviphilus
Pathway
prk00540
Lipopolysaccharide biosynthesis
prk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
prk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
H9N25_24185
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
prk01005
]
H9N25_24185
Enzymes [BR:
prk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
H9N25_24185
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
H9N25_24185
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
H9N25_24185
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
H9N25_24185
Lipopolysaccharide biosynthesis proteins [BR:
prk01005
]
Lipid A
H9N25_24185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QNR87260
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Position
complement(5814686..5815933)
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AA seq
415 aa
AA seq
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MLLLYIIGIRLYTLLIRIFSLFNPKAKLFINGRKNVYTQIAQKINPSEKHIWFHFASLGE
FEQGRPVLEKLKALYPAKKIVVTFFSPSGYEIRKNYALADVFYLPIDTPANAKRFIASIN
PEMAIFTKYEFWHFYFKELKDRGIPLYVISGIFRESQAFFKWYGSFYRNILKSVTYFFVQ
NEESKNLLKSIGLNNVTINGDTRFDRVYENAQSPKQLVLIESFIGNSPTFVCGSTWPEDE
KILSALPEKYPNWKFIIAPHEIHESHIESIEKQFSVGSARFSVFSTQLTDESSQISALKS
QILIIDNIGMLSSLYQYGNVAYIGGGFGTGIHNTLEAAAFGLPVIFGPKYDKFQEAKDLI
AIGAAKSISTIEELIDAFEGFAKNEDAAKQAKRYVTDKKGATDQIISMITKSDRS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgctttacataatcggaattcggctttacactttgcttatcaggatattttcc
ttattcaatcctaaagcgaagctgtttataaatggtcgtaaaaacgtctatacacaaatt
gctcagaaaattaatccgagcgaaaaacatatatggtttcattttgcctctttgggcgaa
tttgaacagggcaggccagttttagaaaagctaaaagccctttatcctgctaagaaaatc
gtagtaacttttttctctccttcgggatatgaaatcagaaaaaattatgccctggcagat
gtattttatctccccattgataccccagctaatgccaaacgttttatagcaagcattaat
cctgaaatggccatttttaccaagtacgaattttggcatttttattttaaggaattaaaa
gatcggggcattcctttatatgtgatttctgggatttttagagaaagtcaggcatttttt
aaatggtacggtagtttttaccgcaatattttaaaatctgttacttacttttttgtacaa
aatgaagaaagtaaaaatcttttaaaatcgatcgggttaaataatgtaaccataaatggt
gatacccgtttcgatcgtgtttatgaaaatgcgcaatcgccaaaacagcttgtcctgatc
gaaagctttatcggcaactcccctacattcgtttgcggaagcacctggcctgaggatgaa
aaaatattatcggctttgcctgaaaaatatcccaactggaagtttatcattgcgccacac
gagatccacgaaagtcatatcgaaagtatcgagaaacagttttcagttggcagtgcacgg
ttttcagttttcagtacgcagttgacagatgaaagttctcaaatctcggctctcaaatct
caaatcttaataattgacaacattggtatgctctcttcattatatcaatatggaaatgta
gcatatattggtggtggttttggaacgggaatacacaacaccttggaagctgcagcgttt
ggcttgcctgtaattttcggcccgaaatacgataaatttcaggaagcaaaagatttaatt
gccataggtgcggccaaaagcatttctactattgaggaattgattgatgcatttgagggt
tttgccaaaaatgaagatgccgcaaagcaagccaaaagatatgttacagataaaaaagga
gcaaccgatcagattatttcgatgattacgaaatcagatcggtcttaa
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