Cutibacterium modestum: BCB70_03140
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Entry
BCB70_03140 CDS
T04515
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
prl
Cutibacterium modestum
Pathway
prl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BCB70_03140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prl03400
]
BCB70_03140
Enzymes [BR:
prl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BCB70_03140
DNA repair and recombination proteins [BR:
prl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BCB70_03140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
UvrD_C_2
AAA_11
Viral_helicase1
RecD_N
AAA_22
Helicase_RecD
SLFN-g3_helicase
UvrD-helicase
CbiA
SH3_13
AAA_25
nSTAND3
UvrD_C
NACHT
AAA_16
NPHP3_N
T2SSE
AAA
TrwB_AAD_bind
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AOH45067
LinkDB
All DBs
Position
669711..671633
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AA seq
640 aa
AA seq
DB search
MADLVPVGAGERLEPFARAGVLESSDIHLANLVCRIGGETNGDVSLAVALSCRELRRGSV
FWDPHEIADVVRRQVLDPAIPDIESSDQAALFAELDWPDPGKWLTALKASPVVADREDPL
NRLPARLDDGMVYLEKYWQAEHDVARDLAVLAADPPSQGPVSADDVVANVSSSLAASGIV
LDPAQADAAVAAITHRISVLAGGPGTGKTTTVCTLLAALQQADPRLGAVALAAPSGKAAA
RLRDSVSQVSERMPDDLKPLVADAATVHSLLKWQGPGTSFGYDEQHKLPFGVVVVDEASM
LSLPLAANLLSAIGPGTRLILVGDPGQLVSVDAGSVLADIVSSADTLQARLPVTILTHNH
RSRGDIARLSEAVREGDTSAALDILVAAAKVTPPFPDDSVANSDRHSITWIDADPASITM
SDLPAVANVIARTGAHMLELTEEGADAAALKLVDAHRLLCAHREGPYGVDEWSQRMVAVL
SDVLPGVDQSRWALGETAIVTHNLAQLGINNGDCGVVVETRPIPTVALPGPGGAPRRLPC
SLIPSLQPLQAMTIHKAQGSQFTDVTVILPPPDSPLLTRELFYTAITRAREHLSVVGTKE
SVERAIDRANDRRSGIQRRWEENRTSSCDRALNVNVPSCR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggctgacctcgtaccggttggagcaggagaacggctagagcctttcgcccgagccgga
gtcctcgaatccagtgatatccatttagccaatctggtctgccgcatcggtggcgaaaca
aatggtgacgtcagtctcgccgtcgctctatcatgccgtgaactccggcgtggctcagtg
ttctgggatccccatgaaatcgcagatgtcgtccgccgtcaggttcttgatccggcaatt
ccagacatcgaaagtagtgaccaggcagcactgttcgcagaattggattggccagaccct
ggcaagtggctaacggcgttaaaagcaagtcccgttgttgctgaccgcgaggatccgctc
aatcggttgccggctcgtcttgatgacggcatggtctacctagagaagtactggcaggct
gaacatgatgtcgcccgcgatctcgctgtcctcgctgcggatccaccaagccaaggccct
gtgtccgctgacgatgttgttgccaacgtcagcagttccttagcagcctccgggatcgtt
ctggacccggctcaagctgatgctgccgttgcagcaattacgcaccggattagtgtcctc
gcgggcggcccagggacgggaaagactaccacggtatgtaccctcttggcggctctccag
caggctgacccgcgccttggagccgtggccctcgcagcccccagcggcaaagccgcggca
cgcttgcgtgactccgtttcgcaggtgtctgagcgtatgcccgacgacctgaaacccctc
gttgctgacgcagccaccgtccactcactgctgaaatggcaggggccggggacctcattt
ggatatgacgagcagcacaagcttccatttggagtcgtcgttgttgatgaagcgtcgatg
ctgtctctacctctggccgctaacctcctgtctgcaatcgggcctggaactcgtctcatc
ctcgtgggggacccaggccagctcgtctcagtggatgccggtagcgtcttggcagatatc
gtgtcgtcagctgacactctccaagcacgacttcccgtcacaatcctcacccacaatcac
cgctctaggggagatatcgcacggttgtcagaggcggtgcgtgagggtgacaccagtgct
gcgttggacatattggtagcagccgcaaaagtaaccccgcctttccccgatgacagcgtt
gcgaacagcgaccgtcacagcatcacatggatcgacgccgacccagcgagcatcactatg
tccgacctcccggcggttgcgaacgtgatcgcacgtaccggggcgcacatgcttgaactg
accgaggagggtgccgacgccgccgcgctcaaactcgtcgacgcccaccgactgttgtgc
gctcaccgagaagggccatacggagtagatgagtggtcgcaacgcatggttgctgtgctc
tcagatgtgttgcccggcgttgaccagagccggtgggctctcggtgaaactgcgatcgtg
acgcacaacctcgcgcagttgggaatcaataacggtgactgcggcgtcgttgttgaaaca
cgccccatcccgacggtggctctacctggacccggtggagccccgagacggctgccgtgt
tccctcatcccatcgttgcaaccactacaggccatgaccattcacaaagcgcagggcagc
cagttcacggacgtgacggtgatcctgccaccacccgactcgcccctcctcactcgcgag
ttgttctacaccgcgatcacgcgtgcccgtgagcacctcagcgtggtgggcaccaaagag
tcggtagagcgggcaattgaccgggccaatgatcgacgctctgggattcagcgacgttgg
gaggagaatcgcacttcctcgtgcgaccgggctctcaacgtcaatgtgccgtcatgtcgg
tga
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