Prochlorococcus sp. MIT 0801: EW15_0396
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Entry
EW15_0396 CDS
T03316
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
prm
Prochlorococcus sp. MIT 0801
Pathway
prm03420
Nucleotide excision repair
prm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
prm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EW15_0396
03430 Mismatch repair
EW15_0396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prm03400
]
EW15_0396
Enzymes [BR:
prm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EW15_0396
DNA repair and recombination proteins [BR:
prm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EW15_0396
MMR (mismatch excision repair)
Other MMR factors
EW15_0396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
NPHP3_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AIQ96488
UniProt:
A0A089PEA2
LinkDB
All DBs
Position
complement(351323..353740)
Genome browser
AA seq
805 aa
AA seq
DB search
MKQSNSIFLNGLNEAQSHAVDHFHGPLLVIAGAGSGKTRALTHRIAHLITEYKVDPSSIL
AVTFTNKAAREMKDRLELLLAKRLSSLTHGKPWTALQVAEQREIRNRIHREISRELWIGT
FHALFSRLLRFDIDKFKDPEGLTWTKQFSIYDETDAQSLIKEIVTQDLQLDPKRFEPKKV
RWAISNAKNQCLLPDDLSNNQEGQRGKLVAETYRLYRKALAANNALDFDDLLLIPVQLLQ
QNEKIRTYWHSRFKHVLVDEYQDTNWTQYELIKQLVTNGKDPSSFQDWNNRSVFVVGDAD
QSIYSFRAADFRILMGFQEDFGKKSLDNTYDSTLVKLEENYRSTSTILEAANSLISNNKE
RIDKVLRATRGEGEPIRLTRCDDEIAEAEAVIHRLRILDASNPELNWGDMAILYRTNAQS
RAIEDSLVRWSIPYIVVGGLRFYDRREIKDLLAYLRLLINPSDSVSLLRVLNVPKRGIGK
TTVQRLSDAASQLKIPLWEVVNDPEAVRSLAGRSAKGLLIFSELINELQSHLLSSSPAEL
VQLVLEKSGYLSELIATGTDEAEERRRNLQELVNAALQYQEESEDANLEGFLSTAALSSD
ADNKDTASNRVTLMTLHSSKGLEFPVVCLVGMEQGLFPSYRSLDDPSSLEEERRLCYVGL
TRAKEKLFLFHASERRMWGGMREPAIASIFLSEIPEELVKGDIPLSGGATLRREKNLDRL
TRIDRQSNKKSFPSEAENAVRKTYSGPSPGKRWSVNDRVEHSSFGEGIITHVFGSGEKIS
LAIKFSGMGPKILDPRLAPLKLIDE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaatcaaacagtatatttctaaatggattaaacgaggcgcagtcacatgcagtt
gatcattttcatggtccattattagttatagcaggagcaggaagcggaaaaacaagagct
cttactcatcgtattgcgcatttaattactgaatacaaagttgatcctagttctattctt
gcagttacttttaccaataaagctgcaagagagatgaaagatagacttgaattgctttta
gcaaaaaggttatcaagtcttacccacgggaagccttggactgccttgcaagtagcagaa
caaagagaaattcgtaatcgtatacatcgtgaaatcagtcgtgaattatggataggtact
tttcacgctttgttttcaagattattacgctttgacatcgataaattcaaagaccctgaa
ggattgacatggactaaacagttttcaatatatgacgaaacagatgcccaaagtcttatc
aaagaaatagttacacaagatctacaattagatccaaaaagatttgaaccaaaaaaagta
cgatgggcaatcagtaatgccaaaaatcaatgcttacttcctgatgatttatcaaataat
caagaaggtcaaagaggaaaattagttgctgaaacttatagactttatagaaaagcttta
gctgctaataatgcattagattttgatgatcttctattaatacctgttcaattactacaa
caaaatgaaaaaataaggacttattggcacagtcgcttcaaacatgttttagttgatgaa
tatcaagatactaattggacacaatacgaattaattaaacaattggttaccaatggtaaa
gatccatcttcttttcaagattggaataatcgatcagtttttgttgttggcgatgcagat
caaagtatttacagctttagagctgcggactttaggatactaatgggatttcaagaggac
tttggaaagaaaagcctagacaatacatatgattcaactcttgtaaaactagaagaaaat
tatcgatctacctctaccatcctcgaagcagcaaattcactaatctccaacaataaagaa
agaatagataaagttcttagagcaactagaggagaaggtgagcctattagattaacaagg
tgtgacgatgagatagcagaggcagaggcagttattcataggctaagaattttagatgcc
tcgaatccagaattaaattggggagatatggctattctttatagaaccaatgcgcaatca
agagcaattgaggactcattggtccgctggagtattccatacattgtggttggaggatta
cgtttttatgatcgaagagaaattaaagatctactagcttatttaagacttttaattaat
ccatctgacagtgtcagtcttctgagagttttaaacgttcctaaaagagggattggcaaa
acaacagttcaaagattgagtgatgctgctagtcaattaaaaattcctctttgggaagtt
gtaaatgaccccgaagctgtcagatcactcgcaggaagatcagccaaaggtcttttaatt
tttagtgagcttattaatgaattacaaagtcatcttctctcttcaagccccgccgagttg
gttcaattagttttagaaaaaagtggctatttaagtgaattaattgcaacaggaacagat
gaggcagaagaaagaagacgcaatcttcaagaattagttaatgccgcgttgcaatatcag
gaagaaagcgaagatgcaaatttagaaggttttttatcaactgctgctctatcaagcgat
gcagataataaagacactgcgtcaaatcgagtcacattaatgactcttcacagcagtaaa
ggtttggaatttcctgtcgtttgtcttgtgggaatggagcaaggcttattcccaagctat
agatcacttgatgatccatcttcacttgaggaagaaaggcgactttgttacgtaggactt
actagagcaaaagaaaaactatttctctttcatgcatctgagagaagaatgtggggaggg
atgagagaaccagctatcgcatctatattcctctccgaaataccagaagaacttgttaaa
ggcgatatcccattatctggtggggctacattaagaagagaaaaaaatctagacagacta
actagaattgatcgccaaagtaataaaaagtcctttcctagtgaagctgaaaatgcagta
agaaaaacatattctggtccttccccagggaagcgatggtcagttaacgatagagttgaa
cattcttcatttggagaagggataatcacacatgtttttggttcaggagaaaaaatctca
ctggccataaaattctcaggaatggggccaaaaatattagacccaagactagctccattg
aaattgatagatgagtaa
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