Prochlorococcus sp. MIT 0801: EW15_0593
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Entry
EW15_0593 CDS
T03316
Name
(GenBank) Group 2 RNA polymerasee sigma factor RNA polymerasee sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
prm
Prochlorococcus sp. MIT 0801
Brite
KEGG Orthology (KO) [BR:
prm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EW15_0593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prm03021
]
EW15_0593
Transcription machinery [BR:
prm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EW15_0593
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
DUF4747
Sigma70_r4_2
DUF1248
Motif
Other DBs
NCBI-ProteinID:
AIQ96685
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Position
complement(530172..531434)
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AA seq
420 aa
AA seq
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MLKEKQTSKNISINQETKNNSKKIKKTVAKVNVTQETQTLSQESSTDLKIDLDLEADKLI
AEANKVPEADIDLDDDDDNASVLSSAQEAAAKALASIKIGPKGVYTEDSIRVYLQEIGRI
RLLRPDEEIELARKIADLLQLEEEAAQFESENGHFPSVKEWAVLAEMPLTRFRRRLMLGR
RAKEKMVQSNLRLVVSIAKKYMNRGLSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATW
WIRQAITRAIADQSRTIRLPVHLYETISRIKKTTKVLSQEFGRKPTEEEIAESMEMTIEK
LRFIAKSAQLPISLETPIGKEEDSRLGDFIEADIENPEQDVAKTLLREDLEGVLATLSPR
ERDVLRLRYGLDDGRMKTLEEIGQIFDVTRERIRQIEAKALRKLRHPNRNGVLKEYIKLN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaggaaaaacagacatctaaaaatatttctattaatcaggaaactaaaaacaat
tccaaaaaaattaaaaaaacagttgccaaagtaaacgtgacccaagaaacccaaactctt
tctcaagaatcttcaactgatctaaaaattgatttagatcttgaggcggataaattaatt
gccgaagctaataaagtccctgaagctgatatcgatttagatgatgatgacgataatgcc
tctgtgctgtcgagtgctcaagaagcagcagctaaagccttagcaagtataaagatagga
ccaaagggtgtttacacagaagactcgattagggtttatctacaagagattggtcgtata
agacttctcagaccagacgaagaaattgaattagccagaaagatagcagatcttcttcaa
ttagaggaagaagctgcgcaatttgaaagtgagaatggacatttcccatcagtcaaagaa
tgggcagttcttgcagaaatgccattaactcgcttccgcaggcgattaatgcttggtaga
cgagcaaaagaaaaaatggtgcaatcgaatctacgattagtagtttcaattgccaagaaa
tatatgaatagagggttgtcttttcaagatcttattcaggaagggagtcttggtctaatt
cgtgctgctgaaaaatttgatcatgagaaaggttataaattctcaacttacgctacttgg
tggataagacaggctatcactagagcaattgcagatcaaagcagaacaattcgtttgcct
gtgcatctatacgaaacaatttcaaggatcaagaaaaccactaaagttttaagtcaagag
tttggaaggaaaccaaccgaggaagaaattgccgaaagcatggaaatgacgattgagaaa
ctcagattcattgccaaaagcgctcagctccccatttctcttgagacccctattggcaaa
gaagaagactctagacttggtgactttattgaagcagacatagaaaatcccgaacaagat
gtcgcaaaaaccttattaagagaagatttggagggtgttctcgctacattaagtcccaga
gagagggatgttctaagacttcgttatggcctagatgatggaagaatgaaaacccttgaa
gaaattggacaaatttttgatgtaactagagagaggattagacaaatagaggctaaggct
ctcagaaaactccgccatccaaatagaaacggggttcttaaagaatatatcaagctaaat
taa
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