Prochlorococcus sp. MIT 0801: EW15_1537
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Entry
EW15_1537 CDS
T03316
Name
(GenBank) Exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
prm
Prochlorococcus sp. MIT 0801
Pathway
prm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EW15_1537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
prm03400
]
EW15_1537
Enzymes [BR:
prm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EW15_1537
DNA repair and recombination proteins [BR:
prm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EW15_1537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
AAA_30
PADR1_N
DEAD
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AIQ97629
UniProt:
A0A089QST4
LinkDB
All DBs
Position
1226931..1230743
Genome browser
AA seq
1270 aa
AA seq
DB search
MLFYDCKYEIDMNNIELFQANKYPLTNGMRLIEASAGTGKTFSLSHLVLRLLTEKEYSIN
EILVVSFTEATASEIKAKIIERLISALKIIESINTNVKPYQIDDVLNEWIELNITSKERG
LYIASLLLEALERIDTADITTIHGFCSKTLRREAIENGNNLNPTIEKDSNSLINEIVEEY
WIKEILEIEISELKGIFKTNFNRKNLIQVLSSLDNDPNNIFKQTFNDLQIEESLSSQLNN
LIDLLWIEFKTIWKEKGQELEEGFIEIAKDLKSQGITGTQPYSSKPRKNRYQLLSNWIEE
YKEKKRPSYEDIQNQTLINKYFHPKNIYKLDMKYKINSCSKEMKETLDIIGALYDSPGEL
VWEHALLFTKRELEKRKSKKGLINYSDLLKLLDPKKLNSKKIKDEYKPNNIYKNLKSRYK
VALIDEFQDTDPVQLRLLKEAFGNSATHLLLMIGDPKQAIYSFRGGSLNTYLKAREACDR
IDLMNANYRSTKSLILTLNKLFLDGLIRSNLSTQELNPCSQEELLKLNGIKEPFKIINLI
DNNQEEKAQRVNLESKSRIEDKIPKVIGSYLLELLSNNPKDLNPSDICILVNRHDQATNI
NSYLSKIKIPSQLLSNENIFTREGAQILQIFINCIVSPYNQQKISILACSELMQWKKKKL
IESKINGDFDSLSSKFNELAKLFPKIGLLGCLSNFLEGKSIADLSQRGTLLGDLYQSSQL
VDEQIHRQQLNALRASQWLSSQRFQPIESIPEEYQPNSAISNSSVNIITIHKSKGLQFKI
VICPYLWQRPPDKKSHLWKDNQNLLISKKYKWHKKYCSYQNFIRKESLNEAERLAYVAFT
RAKQQLIVLWAKAADQEGNPLSGFLFGSESINLKIEEHTKAMMEKSFKRRELRVDIQDIK
AIETNKTWTQPKNEVKLQLGETPKHQFENSWGRYSFSKWISQKDDELILKDFSEELNEDH
AFKDEIEDVSLQKIDQLLIENDQSIDKSEDQVLSIESPIGDFPRGPIAGTCLHKILEKID
FNDIENQLKVSAIIEEELNTVNISNSFIEPINILLKRIANIPLGGPLGKLKMKDLNSKSS
IKELKFDIPICHKANPINTSELSSIFKEDPQNKYGTDYINKLMNLNIYSSGFLTGSIDHI
FADNPNHEIAKWWVLDWKSNWIGSPLSKDGGSFCGPSNYSISRMDEEMYHHHYPLQAHIY
LLALHRFLNWRLPEYSPQKHLGGYIYVFLRGLPDKGDLEEKSFSQRTPGLIVEPAPIKRI
QKLDLLIKRI
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
ttgttattttatgattgtaaatatgaaatagatatgaataatattgaattatttcaagca
aataaatatcctttaactaatggaatgcgcctaatagaagcaagtgctggtacaggcaag
acattctctctttctcatcttgtcttaaggttattgactgaaaaagagtattcgataaac
gaaatactggttgttagctttacagaagctacagcatcagaaataaaagcaaaaatcatt
gaaagactaatttcagcattaaaaataattgaatcaataaatacaaacgtaaaaccatat
caaattgacgacgtattaaatgaatggattgaattaaatattacatccaaagaaaggggt
ttatatatagcttccctgctattagaagcattagaaagaattgacactgcagatatcaca
acaattcatggattttgcagtaaaactcttcgtagagaagctatagagaatggtaataat
ttaaacccaaccattgaaaaagattcaaattcactaataaatgaaattgttgaagaatat
tggataaaagaaatattagaaatagagatttcagaattaaaagggatatttaaaactaat
tttaatcgtaagaatttaattcaagttcttagttcattggataatgatccaaataatatt
ttcaaacaaacatttaatgacttacaaatagaagaaagtctttcaagtcaattaaacaac
ttaattgatttattatggatagaatttaaaactatatggaaagaaaagggccaagagctt
gaagagggatttatagaaattgcgaaagatctaaaatctcagggtattacagggacacag
ccatactcatccaagcctaggaaaaatcgttatcagcttttaagtaactggattgaagaa
tataaagagaaaaaacgaccatcatatgaggatattcaaaatcaaacccttataaataaa
tattttcatcctaaaaatatttacaaattagatatgaaatataaaataaattcttgttca
aaagaaatgaaggaaacacttgatatcataggagctttatacgatagtccaggtgaatta
gtttgggaacatgctttgttatttactaagagagagcttgagaaaagaaaatctaagaag
ggtctgataaattattctgatctacttaaattattagaccctaaaaaactcaatagtaaa
aaaattaaagatgaatataaacctaataatatctataaaaacttaaaatctagatataaa
gtagccttaatcgatgagtttcaagatactgacccagtccagttaagattactaaaagaa
gcctttggtaacagtgcaacgcatctattactaatgattggagatccaaagcaagcaatc
tatagtttcagaggtgggagtttaaatacatacttaaaagcccgagaagcttgtgatcga
attgatttgatgaacgctaattatagaagtacaaaatccctaatcttaactcttaataaa
ttatttcttgatggtttaattagatcaaatctatcgactcaagaacttaatccatgttca
caagaagagctattaaaactgaatggtataaaagaaccatttaagataataaatctaata
gataacaatcaagaggaaaaagcacaaagagtaaacttagaatcaaaaagcagaatcgag
gataaaattccgaaagttattggatcttatctgttagaactattaagcaataatcctaaa
gatttaaacccctcagatatttgcatactagttaatagacacgatcaagctaccaacatc
aatagctatttatcaaaaataaaaatcccttcacaactcctaagcaatgaaaatattttt
actagagagggtgctcaaattctacagattttcattaactgcatcgtcagtccatacaac
caacaaaaaatttccattttggcttgttctgagctaatgcaatggaaaaagaaaaaactt
attgaatcaaaaattaatggggattttgattcattatcttcgaagttcaatgaacttgcc
aaattatttccaaagattggattgttagggtgtttatcaaactttctagaaggtaaatca
atagctgacctttctcaaagaggaactttgttaggtgatttatatcaaagctctcagtta
gtagacgaacagatccatcgacagcaattgaatgctttaagagcatcacaatggcttagc
tcgcaacgattccagcccatcgagtcaatacctgaagagtatcaacctaatagtgccatt
agtaatagctccgtaaatatcattacaatccataagagtaaaggacttcaatttaaaata
gtaatctgtccatacttatggcaaagacctccagataaaaaaagtcatttatggaaagat
aatcaaaatctattaatttctaaaaagtataaatggcataaaaaatattgttcatatcaa
aatttcattagaaaagaatcattaaatgaagcagagcggttagcttacgttgcttttaca
agagccaagcaacaattaatagtcctgtgggcaaaggctgctgatcaagaagggaaccct
ctttcaggatttttatttggatctgaatcaataaatttaaaaatagaagagcatacaaaa
gcaatgatggaaaagtcattcaagagaagggaactaagagttgatattcaggatataaaa
gcaattgaaactaataaaacatggactcaaccgaaaaatgaagtcaaattacaacttgga
gaaactcctaaacatcagtttgagaatagttggggaaggtatagtttttcaaaatggata
tcacaaaaagatgacgaattaattctgaaagacttttcagaagagttaaatgaagatcat
gcatttaaagatgaaattgaggatgtatctctccaaaaaattgatcaattattgatagag
aacgatcaaagtattgacaaatcagaagatcaggttttatcgatcgaaagtcctattggt
gatttcccccgaggtcctatagcagggacttgtcttcataaaatacttgaaaaaatagat
ttcaatgatattgaaaatcaactaaaagtttcagctataatagaagaagaattaaataca
gttaatataagtaattcatttattgaaccaataaatattttattaaagagaattgcaaat
attcctttaggtggtcctttaggtaaattaaagatgaaagatttaaattctaaaagctct
atcaaagaattaaaatttgatattccaatttgtcataaagctaatccaattaatacttca
gaattatcatccatatttaaagaagatccccaaaataaatatggtacagactatataaat
aaacttatgaatctaaatatctatagcagcggtttcctaaccggatccatagaccacatt
tttgcagacaacccaaatcatgaaattgctaaatggtgggttttagattggaaaagtaac
tggataggaagtccactatcaaaagatggtggatctttttgtggtccctctaattattca
atttccagaatggatgaagaaatgtaccatcaccactatccacttcaagctcatatatat
ttacttgctttacatagatttttaaattggagactccccgagtattcacctcaaaaacat
cttggaggttacatttacgtgtttttgagaggacttccagataaaggagatttagaagaa
aagagtttctctcaaaggactccaggcttaatcgtagaacctgctcctattaaaagaatt
caaaaattagatttattgattaaaagaatttaa
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