Prochlorococcus sp. MIT 0801: EW15_1937
Help
Entry
EW15_1937 CDS
T03316
Name
(GenBank) DNA-directed RNA polymerasee delta ( beta'') subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
prm
Prochlorococcus sp. MIT 0801
Pathway
prm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EW15_1937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prm03021
]
EW15_1937
03400 DNA repair and recombination proteins [BR:
prm03400
]
EW15_1937
Enzymes [BR:
prm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EW15_1937
Transcription machinery [BR:
prm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EW15_1937
DNA repair and recombination proteins [BR:
prm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EW15_1937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
AIQ98029
UniProt:
A0A089QU32
LinkDB
All DBs
Position
complement(1579443..1583552)
Genome browser
AA seq
1369 aa
AA seq
DB search
MTSSSPKTRKSSTKSKAKRGSKAKKAAEMKVVQRLSKTPPPFRNKVVDKKVLKNLVAWAF
KHHGTAATASMADNLKDLGFRYATQAAVSISVDDLKVPEAKQDLLGQAEELITATEECYR
LGEITEVERHTKVIDTWTETNERLVDAVKKNFNQNDPLNSVWMMANSGARGNMSQVRQLV
GMRGLMANPQGEIIDLPIRTNFREGLTVTEYVISSYGARKGLVDTALRTADSGYLTRRLV
DVAQDVIVREEDCGTTRSILISAEDGSFGNRLVGRLTSEQVVNADQEVLAERDTPIDPQL
SKKFEQSHIQGVRVRSPLTCEATRSVCRKCYGWALAHNQLVDLGEAVGIVAAQSIGEPGT
QLTMRTFHTGGVSTAETGVVRSTLSGKVEFGSKARVRGYRTPHGVEAQQAEVDFNLSIVP
TTGGKSQKIDIPIGSLLFVDNGQNIDMDITVAQIASGTVQKSVEKATKDVICDLAGQVRY
ETIIQPREVTDRQGNITLKAQRLGRLWVLAGDVYNLPPNALPVVTGNVSVKEGQVLAEAS
QASEFGGEVRLRDSIGDSREVQIVTTSMTLNDFKLLEESTHSGEIWHLEAQDNTRYRLNT
IPGSKIGNNEVIAELSDDRFKTETGGLVKYAPGLTIKKARSAKNGYEVSKGGTLLWIPQE
THEINKDISLLMIKDRQWIEAGTEVVKDIFSQTAGIVTVTQKNDILREIIVRSGTFKLCK
ESKALDRFEGDGQIVNPGETIAKGIKTDSMVMVQSVETPEGKGLLLRPVEEFTIPDQAQL
PELKHVKQPKGPSLGIKASQRLAFKDGELIKSVEGIELLKTQLMLETFDTTPQMTVDVEV
TQDLNSKTGDRLKLVILESILVRRDTTSDSSHGSTHTELQIENAQIVVAGDVVATTQILC
KQEGVVQLPDAVDGDPVRRLIVERDEDTITIDSKGTTLLKVGQRVVDGDLVSKDQSIGAC
GEIENIDGKKVKLRLGRPYMVSPDSVLHVRDGDLVQRGDGLALLVFERQKTGDIVQGLPR
IEELLEARRPRDSAILCKKSGTVEIKEGDDDDSLVVSIIEENDAISEYPILLGRNVMVRN
SQQVVAGEFLTDGPVNPHELLECFFIDLRDKKPLMDAAQEAIAKLQHRLVSEVQNVYKSQ
GVAIDDKHIEVIVRQMTSKVRIEDAGDTTFLPGELIELRQVEDTNQAISITGGAPSEFTP
VLLGITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFS
GFVEELNAEAGPHPDILAEDPAGYRRIQNLRPDYTVDMPSSPVAKNTSVLADPSEEDLEA
TRSRHGIDPTTSNFAAFARPTGDDESPEDQMPDPAALEGLQEEGLLSDE
NT seq
4110 nt
NT seq
+upstream
nt +downstream
nt
atgacttcttcctctcctaaaactcgtaaatcctctactaaatcaaaagcaaaaagaggc
tctaaagcaaagaaagcagcagagatgaaagtagtccaaagactttctaaaactcctcct
ccctttagaaataaagtagttgataagaaagttttgaaaaatttagttgcatgggcattc
aagcatcatggaacagctgcaacggcttctatggcagataacttgaaagatcttggcttt
agatatgcaacccaggcggcagtttcaatttctgttgatgatttaaaagttccagaggca
aaacaggatttactcggtcaggccgaagagctaatcacagcgacagaggaatgctataga
ttaggagaaattactgaggttgagaggcatacaaaagttatagatacttggactgagacc
aatgaaagattagttgatgcagttaaaaagaatttcaatcaaaacgatccattaaattca
gtatggatgatggctaattcaggagccagaggaaatatgtctcaggtccgtcagcttgtt
gggatgagaggattaatggctaatcctcaaggagagattattgacttgcccataagaact
aattttagagagggtctaacggtaactgaatatgttatttcctcttatggagctcgtaaa
ggtcttgttgatactgctttaagaactgctgactctggatatttaactagacgcttggtt
gacgtcgctcaagacgtaattgttcgagaagaggattgtggtaccacgagatcaatttta
attagtgcagaagatggaagctttggtaataggcttgttggacgcttgacctctgaacaa
gtagttaatgcagaccaagaagttttagctgaaagagatactccaattgatcctcagcta
tctaagaaatttgaacaatcacatattcaaggtgtgagggttagatctcctcttacgtgt
gaggcgaccagatcagtttgtcgtaaatgttatggttgggcgctggcgcataaccaactt
gttgatttaggggaagcggtaggtattgttgctgctcaatctattggggagccaggtacc
caattaactatgagaactttccatactggtggggtttcaacagcagaaactggtgtggtt
cgctccactctttcaggaaaagttgaatttggttcaaaggcacgagtaagaggttataga
acaccacatggtgttgaagctcagcaagcagaggttgattttaatctaagtattgttccg
acaactggtggcaaatctcaaaaaattgatatacctattggttctctactctttgtagac
aatggtcaaaatattgatatggatattactgtcgctcagattgccagtggaactgtacaa
aaaagtgttgaaaaagctactaaagatgttatctgtgatttggctggacaagttaggtat
gaaacaattatccaacctagagaggtcacagacaggcaaggtaatatcactcttaaagca
caacgactcggtcgactttgggttctagcaggagacgtatataatttacctcctaatgca
ttgccagttgtaactggcaatgtttctgtaaaagagggacaagttttagctgaagcgagt
caggcaagtgagtttggaggtgaagtaagactcagagattctatcggtgactctagagaa
gtccaaatagtcacaacttcgatgactttaaatgattttaaattacttgaagagtcaacg
cactcaggcgaaatatggcatcttgaagcccaagataatactcgttatagactgaatact
attcctggaagcaaaattgggaataacgaggtaatagctgagttatcagatgatcgcttt
aaaactgaaacaggtggacttgttaaatatgcccctgggttgacaattaagaaagctcgt
tctgcaaagaatggctatgaggtaagtaaagggggaactttgttatggatccctcaagag
actcatgaaatcaataaggatatttcattgttaatgattaaagatcgccaatggatagag
gcagggacagaagttgttaaagatatttttagtcaaactgcaggaatagttacagttact
caaaaaaatgatattctcagagaaataatagtgagaagcggtacttttaaactttgtaaa
gaaagtaaagcacttgatagatttgaaggagatgggcaaatagtgaatcccggagaaact
atcgcaaaagggattaagactgattcaatggtaatggttcaatcagttgagacaccagaa
ggtaaaggtcttttattaagacctgtagaggaattcacgattcctgatcaggcacaatta
cctgaattaaagcatgttaaacaacctaaaggcccatcactaggtataaaagcatctcaa
agactcgcttttaaggatggcgaacttattaaatctgttgaaggtattgagttgttgaaa
actcaactgatgcttgagacatttgacactacgccacagatgacagtagacgtagaagta
acacaagacttaaattcaaagactggtgatagattaaaattagtaatacttgaaagtatt
ttagtcagaagagatacgacatctgattctagccatggatcaacacacactgaattacag
attgaaaacgctcaaattgttgtagctggagacgttgtagctacaacgcagatcttgtgt
aagcaggaaggagttgttcaactccctgatgctgttgacggagatccagtccgtcgactt
atcgttgaaagggatgaagatacaataacaatcgattcaaaaggaactactcttttgaaa
gtaggacaaagagtagtagatggagacttagtttcaaaagatcaatcaattggtgcttgt
ggtgaaatagaaaatatagatggaaagaaagttaagttgcgtcttggtagaccttatatg
gtttcaccagattcagtccttcatgttcgtgatggtgatctggtacaaagaggagatggt
ttggctttgttggtttttgaaagacaaaaaacaggagatattgttcaaggtttaccgagg
attgaagaattactcgaagctcggagacccagggattcagctattttatgcaaaaaatct
ggaacagtagaaattaaagaaggagatgacgatgactccttagttgtatctattattgag
gagaatgatgcgatttctgagtacccgattttgttaggtcgtaacgtaatggtaagaaat
agccaacaagttgtagctggtgaattcttgactgatggcccagtaaatccacatgagctt
ttggaatgtttctttatagacctgcgtgataaaaaacctttaatggatgcagctcaagag
gctatagctaagctccagcataggctggtaagcgaagtgcaaaatgtttataaatctcaa
ggggtagctatagacgataaacatatagaagttatagttcggcagatgactagtaaagtg
cgaatagaagatgctggagatacaacatttttacctggagagctgatcgaactcaggcaa
gttgaagatacaaatcaggctatatcgattactggaggtgctccatcggaattcactcct
gtattacttggtattacaaaagcatcgcttaataccgatagtttcatatcagcggcttca
ttccaagaaacaactcgagttcttaccgaagcggctattgaaggtaagtctgattggctt
cgtggacttaaagaaaatgttattattggtcgtttgatacctgccggtacaggttttagt
ggctttgttgaagagttgaatgctgaagcaggtcctcatccagacattcttgcagaagat
ccggctggctatcgaaggatacaaaaccttagacctgactatactgttgatatgccttct
tccccagtcgctaagaatacctctgttttggctgacccaagcgaagaggatttagaggca
actagaagtagacatggaattgaccctacaacgagcaattttgcagcatttgcgcgtcca
acaggcgatgatgaatcgcctgaagaccaaatgccagatcctgctgcgttggagggattg
caagaagaaggcctgctttcagatgaataa
DBGET
integrated database retrieval system
