Prochlorococcus sp. MIT 0801: EW15_2055
Help
Entry
EW15_2055 CDS
T03316
Name
(GenBank) DNA-directed RNA polymerasee alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
prm
Prochlorococcus sp. MIT 0801
Pathway
prm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
prm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EW15_2055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prm03021
]
EW15_2055
03400 DNA repair and recombination proteins [BR:
prm03400
]
EW15_2055
Enzymes [BR:
prm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EW15_2055
Transcription machinery [BR:
prm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EW15_2055
DNA repair and recombination proteins [BR:
prm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EW15_2055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AIQ98147
UniProt:
A0A089PEF6
LinkDB
All DBs
Position
complement(1683908..1684714)
Genome browser
AA seq
268 aa
AA seq
DB search
MGGLEGSAVTAVRIAGVNHEYATIPGVREDVLDILLNCKQISVDSRSQELEIGRLVVTGP
AEVKAKDIQFSSQVEVVDGDRPIATVQEGHNLELEIHVERGVGYRPVDRRNEETSAIDLL
QIDAVFMPINRVNFTIDETAVAEGGSTRERLKMELVTDGSTSPDDALAEAANQLIELFQP
LATVSMVEEIPEEPEPAAEAQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIK
NFGSKSADEVIEALERIGISIPQSRTSA
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgggcggactcgagggcagcgcagttactgctgtaaggattgcaggtgttaatcatgaa
tatgcaacaattcctggtgtaagagaggacgtcctagacattcttctgaattgtaaacaa
atttcagttgacagccgtagtcaagagcttgagataggaagacttgttgtgacaggacca
gctgaagttaaagcaaaggatattcagttctcatctcaagttgaagttgttgatggcgat
cgtccaatagcaacagttcaggaggggcataacctagaactagaaatacatgtagaaaga
ggcgttggatatcgaccagttgatagaagaaatgaagagacaagcgcaattgatttactt
caaatagatgctgtatttatgcctataaatagagttaattttactattgatgaaactgct
gtggctgaggggggatcaactagagaaagattaaaaatggagttggtcaccgatggatcc
acctctccagacgatgcattagcggaagctgcgaatcaattaatcgaactttttcaacct
cttgctactgtctcaatggtagaagagattcctgaagagccagagcctgcagcagaggcc
caaattcccctcgaggagttaaacttgtcagtaagagcttacaattgcctaaaacgagcc
caagtgaactctgtttcagacttgatgggtttcagttatgaggatttattggaaattaag
aacttcggttctaaatccgctgatgaagttattgaagctctagagagaattgggatttct
attccacaaagtagaacttccgcatga
DBGET
integrated database retrieval system
