Polaribacter reichenbachii: BW723_02560
Help
Entry
BW723_02560 CDS
T04692
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
prn
Polaribacter reichenbachii
Pathway
prn02020
Two-component system
prn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
prn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BW723_02560
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BW723_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
prn03021
]
BW723_02560
Transcription machinery [BR:
prn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BW723_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
SPT2_N
MarR
CEP76_N
SF3b1
Motif
Other DBs
NCBI-ProteinID:
APZ45244
UniProt:
A0A1B8TVR7
LinkDB
All DBs
Position
582975..584432
Genome browser
AA seq
485 aa
AA seq
DB search
MLKQSLQYKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKDESDNFDEDL
SNEYDDAGTEKIEAEDINIDEYLSDDEIPNYKTQANNYSSDDEEKNVPYAAGTSFHQSLK
NQLNTYSLDDDERAIAEFLVGSIDDSGYIRREIIDLVDDLAFTANIFTTEEKVIYVLKKA
VHTLDPIGVGARDLKECLIIQLKAKNSNKTRSLSIDILENAFDHFVKKHYKKLQEKFNIS
EEELKEVNKEISKLNPKPGSSYAGNNKIAEQIVPDFSIKITDGELDLTLNSRNAPELHVS
REYNNMLKGYKESNTKSKSQKDAVFFIKQKLDAAKWFIDAIKQRQQTLLVTMNTIMHYQY
DYFLTGDERKLKPMILKDIADKINMDVSTVSRVANSKYVSTPYGTKLIKEFFSESMKNDQ
GEDVSTKEIKKILETVIAEENKKKPLTDEKLSKILKEKGYPIARRTVAKYREQLDLPVAR
LRKEI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacaaagtttacaatacaaactacttcaaaaattatctcctcaacaaattcag
ttgatgaaattaatacaattgcctacacaagcttttgaagaacgtttaaagcaagaaatt
gaagaaaacccagctttagatactggtaaagatgaatctgataattttgatgaagattta
tctaacgaatatgatgatgctggtacagaaaaaatagaggcagaagacattaatattgat
gagtatttgagcgatgatgaaatacctaattataagacgcaagccaataattactcctca
gatgatgaagaaaaaaatgtgccttatgctgcaggaacaagttttcatcaatctttaaaa
aatcaattaaacacttatagtttagatgatgatgaacgcgcaattgcagaatttttagtg
ggtagtatagatgatagtggttacattagaagagaaattattgatttagttgatgattta
gcgtttaccgcaaacattttcacaaccgaagaaaaagtaatttatgtattaaaaaaggca
gttcatactttagatcctattggtgttggtgcaagagatttaaaagaatgcttaatcatt
caattaaaagcaaaaaacagtaataagactagaagtttatcaatagatattttagaaaat
gctttcgatcattttgtaaaaaaacattacaaaaaactacaagaaaagtttaatatttct
gaagaggaattaaaagaagtaaataaagaaatatctaaattaaatccgaaacctggtagt
tcttatgctggtaataataaaattgcagaacaaattgtaccagatttttcaattaaaatt
actgatggagaattagatttaaccttaaactcaagaaacgcaccagaattgcacgtttct
agagagtataataatatgctaaaaggttataaggaatcgaatacaaaaagtaagtctcaa
aaagatgctgtgttttttatcaaacaaaaattagatgctgcaaaatggtttatagatgct
attaaacagcgccagcaaacgcttttagtaactatgaatacaattatgcattatcaatat
gattattttttaacgggtgatgaacgcaagttaaaaccaatgattttaaaagatattgct
gataaaattaatatggatgtttctaccgtttctagagttgcaaacagcaaatacgtttct
acaccttacggaactaaattaattaaggaattcttctcagaatctatgaaaaatgaccaa
ggtgaagatgtttctactaaagaaataaagaagatattagaaacagtaatagcagaagaa
aacaaaaagaaacctttaacggatgagaagttatctaaaattttaaaggaaaaaggttac
cctatagcaagaagaacagttgctaaatatcgtgagcaattagatttacctgtagctcgt
ttacgtaaagaaatctag
DBGET
integrated database retrieval system