KEGG   Polaribacter reichenbachii: BW723_02560
Entry
BW723_02560       CDS       T04692                                 
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
prn  Polaribacter reichenbachii
Pathway
prn02020  Two-component system
prn02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:prn00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    BW723_02560
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    BW723_02560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:prn03021]
    BW723_02560
Transcription machinery [BR:prn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     BW723_02560
SSDB
Motif
Pfam: Sigma54_CBD Sigma54_DBD Sigma54_AID LacI SPT2_N MarR CEP76_N SF3b1
Other DBs
NCBI-ProteinID: APZ45244
UniProt: A0A1B8TVR7
LinkDB
Position
582975..584432
AA seq 485 aa
MLKQSLQYKLLQKLSPQQIQLMKLIQLPTQAFEERLKQEIEENPALDTGKDESDNFDEDL
SNEYDDAGTEKIEAEDINIDEYLSDDEIPNYKTQANNYSSDDEEKNVPYAAGTSFHQSLK
NQLNTYSLDDDERAIAEFLVGSIDDSGYIRREIIDLVDDLAFTANIFTTEEKVIYVLKKA
VHTLDPIGVGARDLKECLIIQLKAKNSNKTRSLSIDILENAFDHFVKKHYKKLQEKFNIS
EEELKEVNKEISKLNPKPGSSYAGNNKIAEQIVPDFSIKITDGELDLTLNSRNAPELHVS
REYNNMLKGYKESNTKSKSQKDAVFFIKQKLDAAKWFIDAIKQRQQTLLVTMNTIMHYQY
DYFLTGDERKLKPMILKDIADKINMDVSTVSRVANSKYVSTPYGTKLIKEFFSESMKNDQ
GEDVSTKEIKKILETVIAEENKKKPLTDEKLSKILKEKGYPIARRTVAKYREQLDLPVAR
LRKEI
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgctaaaacaaagtttacaatacaaactacttcaaaaattatctcctcaacaaattcag
ttgatgaaattaatacaattgcctacacaagcttttgaagaacgtttaaagcaagaaatt
gaagaaaacccagctttagatactggtaaagatgaatctgataattttgatgaagattta
tctaacgaatatgatgatgctggtacagaaaaaatagaggcagaagacattaatattgat
gagtatttgagcgatgatgaaatacctaattataagacgcaagccaataattactcctca
gatgatgaagaaaaaaatgtgccttatgctgcaggaacaagttttcatcaatctttaaaa
aatcaattaaacacttatagtttagatgatgatgaacgcgcaattgcagaatttttagtg
ggtagtatagatgatagtggttacattagaagagaaattattgatttagttgatgattta
gcgtttaccgcaaacattttcacaaccgaagaaaaagtaatttatgtattaaaaaaggca
gttcatactttagatcctattggtgttggtgcaagagatttaaaagaatgcttaatcatt
caattaaaagcaaaaaacagtaataagactagaagtttatcaatagatattttagaaaat
gctttcgatcattttgtaaaaaaacattacaaaaaactacaagaaaagtttaatatttct
gaagaggaattaaaagaagtaaataaagaaatatctaaattaaatccgaaacctggtagt
tcttatgctggtaataataaaattgcagaacaaattgtaccagatttttcaattaaaatt
actgatggagaattagatttaaccttaaactcaagaaacgcaccagaattgcacgtttct
agagagtataataatatgctaaaaggttataaggaatcgaatacaaaaagtaagtctcaa
aaagatgctgtgttttttatcaaacaaaaattagatgctgcaaaatggtttatagatgct
attaaacagcgccagcaaacgcttttagtaactatgaatacaattatgcattatcaatat
gattattttttaacgggtgatgaacgcaagttaaaaccaatgattttaaaagatattgct
gataaaattaatatggatgtttctaccgtttctagagttgcaaacagcaaatacgtttct
acaccttacggaactaaattaattaaggaattcttctcagaatctatgaaaaatgaccaa
ggtgaagatgtttctactaaagaaataaagaagatattagaaacagtaatagcagaagaa
aacaaaaagaaacctttaacggatgagaagttatctaaaattttaaaggaaaaaggttac
cctatagcaagaagaacagttgctaaatatcgtgagcaattagatttacctgtagctcgt
ttacgtaaagaaatctag

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