Polaribacter reichenbachii: BW723_08350
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Entry
BW723_08350 CDS
T04692
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
prn
Polaribacter reichenbachii
Pathway
prn03030
DNA replication
prn03430
Mismatch repair
prn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
prn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BW723_08350
03430 Mismatch repair
BW723_08350
03440 Homologous recombination
BW723_08350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
prn03032
]
BW723_08350
03400 DNA repair and recombination proteins [BR:
prn03400
]
BW723_08350
Enzymes [BR:
prn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BW723_08350
DNA replication proteins [BR:
prn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BW723_08350
DNA repair and recombination proteins [BR:
prn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BW723_08350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
HHH_3
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
APZ46307
UniProt:
A0A1B8U6U3
LinkDB
All DBs
Position
complement(2010302..2014639)
Genome browser
AA seq
1445 aa
AA seq
DB search
MYLIFDTETTGLPKSWNAPITDTDNWPRCIQIAWQLHDEMGNVLEHNDFLIQPDGFNIPY
DAERIHGISTELAAEQGIALDKGLDLFNEALKKTKFIVGQNVGFDINIMGCEFHRLGVEN
NLTKLPLLDTCTEKTAQMCQIPGGRGGKFKLPTLTELHNHLFGVGFGEAHNATADVEATT
RCFLELIRLREFTKEQLDVDADYFKNFSEANPKPIQVIGLKHINLKKESDKIRKRLEKLK
DVKETKSTSEGLAELKDVQFAHLHNHTQYSVLQSTMQIGNIVKAAAKDNMPAIAMTDTAN
MMASFHFVSAILNHNKSAENPIKPIIGCEFNVCEDHKNKSQKDNGYQVVLLAKNKKGYHN
LAKMSSIAFVDGFYYVPRIDREIIKKYKDDIIVLTGNLYGEVPSKILNLGEKQAEEALLW
WKEEFQDDFYIELMRHNQQDENIVNETLLKFSKKHDIKIVATNNTFYLEKKDANAHDILL
CVKDGEKQATPKGKGRGYRYGLPNEEYYFKSSDEMKTLFADLPEAIINIQEIVDKIEIFT
LARDVLLPAFDIPEKFKDAKDDEDGGKRGENNFLKHLTFEGAKIRYGEITESIKERLDFE
LEVIEKTGYPGYFLIVEDFIREARKMDVAVGPGRGSAAGSVVAYCLWITNIDPIKYDLLF
ERFLNPERVSMPDIDIDFDDEGRGRVMDYVIDKYGANQVAQIITYGTMAAKSSIRDTARV
LDLPLFEADRIAKLIPGIKLKNIFGDDPKSKGKVDGLRAEEKQLVEELRNMSFGSDLVSE
TINKATILEGSVRNTGIHACGVIITPGDITNYVPVALAKDSDMYVTQFDNSVVESAGLLK
MDFLGLKTLTLIKDTVKIVKAKHNVDLDPENFPLDDEKTYELFQRGETVGIFQYESPGMQ
KHMRSLKPTVFADLIAMNALYRPGPMEYIPSFINRKHGTEDIEYDLPAMEEYLAETYGIT
VYQEQVMLLSQKLADFTKGEADVLRKAMGKKQIAVLDKMKPKFIEQAGKNGHDEEKLEKI
WKDWEAFASYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMASVLSNNMKDIKAVSFFMEEC
KRMGLEVLGPDLNESYLKFSVNKDGAVRFGMAAVKGVGAAAVRAIIKERTENGNYTSIFD
LAKRVDLRAANKKSFDSLIKAGAFDSFTDTHRAQYFATDEKGLTFLERAMKFGSKYQENK
NSAQVSMFGEASTVQFPEPDIPECETWGTMELLSQEKEVIGIYISAHPLDDFKNEMIFCN
ASLKYFKEDLAKYVGMNLSFAGIITDVQHRVSKAGKGWAMFTIEDYGDSNEFRIFGEDYL
KMKHFLVPNSFLFVRATIQPGWTNKEGVTGEPRLKFTEMKLLHDIMDELCKKLTIKISVD
DITEETIANLQRILRTNGGKQSLKFTIWDAKEKIEVNLPSRNTKVNVSNELLATLQNQQI
NYKLN
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatttttgatactgaaaccactggtttacccaaaagttggaatgcaccaatt
acagacacagataactggccaaggtgtattcaaattgcatggcaattgcatgacgaaatg
ggtaatgtattagaacataacgattttttaattcagccagatggttttaatattccttat
gatgcagaaagaattcacggaatttctacagaattagcagcagaacaaggtattgcttta
gataaaggtttagatctttttaacgaagcgcttaaaaaaaccaaatttattgttgggcaa
aatgttggtttcgatatcaatattatgggatgtgaatttcatagattaggtgtagaaaac
aacctaacaaaactgccacttttagatacttgtacagaaaaaacggcacaaatgtgtcaa
attcctggtggtagaggaggtaaatttaaactaccaactttaacagaattacacaatcat
ttatttggtgttgggtttggagaagcacacaatgcaactgcagatgtagaggctactaca
cgttgtttcttagaattaattcgtttaagagaatttaccaaagaacaattagatgtagat
gctgattattttaaaaatttttcagaagcaaacccaaaaccaatacaagtaattggttta
aaacacatcaaccttaaaaaagagagtgataagattcgtaaacgtctagaaaaattaaaa
gacgttaaagaaaccaaatctacatcagaaggtttagccgaattaaaagatgtacaattt
gcacatttacacaaccatacacaatattctgttttacaatctacaatgcaaattggcaac
attgtaaaagcggctgcaaaagacaacatgccagccattgcaatgacagatactgcaaat
atgatggcttcttttcattttgtaagcgccattttaaatcataataaaagtgcagaaaac
ccaataaaaccaattattggttgcgaatttaatgtttgtgaagatcataaaaacaaatcg
caaaaagacaatggttaccaagttgttttgttggctaaaaacaaaaaagggtatcataat
ttggcaaaaatgtcttccattgcttttgttgatggattttattatgtgccaagaattgat
agagaaatcatcaaaaaatataaagatgatatcattgttttaactggtaatttatatgga
gaagtaccaagtaaaattctaaatcttggtgaaaaacaagctgaagaagctttgctttgg
tggaaagaagaattccaagatgatttttacattgagttgatgcgccataatcaacaagat
gaaaatattgtaaatgaaaccttattaaaattctcaaaaaaacacgatataaaaattgtt
gccacaaataacacattttatctagagaaaaaagatgcaaatgcgcacgatattttattg
tgtgtaaaagatggtgaaaagcaagctacaccaaaaggaaaaggtcgtggttacagatat
ggtttgccaaacgaagaatattattttaagtcttcggatgaaatgaaaaccctttttgca
gacctgccagaagcaattatcaacattcaagaaattgtagataaaattgaaattttcacg
ttagcaagagacgttttattaccggcttttgatattccagaaaagtttaaagatgcaaaa
gatgatgaagatggaggaaaacgaggtgaaaataatttcttaaaacacttaactttcgaa
ggcgcaaaaattcgttatggagaaattacagaatccattaaagagcgtttagattttgaa
ctagaagtaattgaaaaaacaggttaccctggttattttttgattgtagaagattttatt
cgcgaagccagaaaaatggatgttgctgttggtcctggacgtggttctgcagctggttct
gtagttgcttattgtctttggattacgaatatagacccaattaaatacgatttacttttt
gagcgtttcttaaatcctgagcgtgtttccatgccagatatcgatatcgattttgatgat
gaaggtcgaggtcgagttatggattatgtaattgataagtatggcgcaaatcaagttgcg
caaattattacttacggaacaatggctgcaaaatcttcaattagagatacagccagagtt
ttagatttaccactttttgaagcggatagaattgccaaattaattccaggaattaaacta
aaaaatatttttggtgatgatccaaaaagtaaaggtaaagttgatggtttacgagcagaa
gaaaaacaattagtagaagaactaagaaatatgtcttttggttctgatcttgtttctgaa
accattaataaagctacaattttagaaggttctgtaagaaacacaggtattcacgcctgt
ggtgtaattattactcctggagatattaccaactatgttcctgttgctttggcaaaggat
tctgatatgtatgttacccaatttgacaactctgtagtagaatctgcaggtttgttaaaa
atggatttcttaggattaaaaacacttactttaattaaagacactgtaaaaattgtaaag
gcaaaacacaatgttgatttagatccagaaaattttcctttagatgatgaaaaaacctat
gaattattccaaagaggagaaactgtaggtatttttcaatacgaatctccagggatgcaa
aaacacatgcgttctttaaaaccaaccgtttttgcagatttaattgcaatgaatgccttg
tacagacctggaccaatggaatacattccgagttttatcaacagaaaacatggaacagaa
gatattgagtacgatttaccagcaatggaagagtatttggcagaaacttacggtattaca
gtttaccaagagcaggtaatgttactctcgcaaaaactggcagattttaccaaaggtgaa
gccgatgttttacgtaaagcaatgggtaaaaagcaaattgcggttttggataaaatgaaa
ccaaaattcattgagcaagctggtaaaaatggtcatgatgaagaaaagctagaaaaaatc
tggaaagattgggaagcctttgcaagttatgcctttaacaaatctcactctacttgttat
gcttggattgcttatcaaactgcctatttaaaagcacattatcctgcagaatatatggct
tctgtactttctaataatatgaaagatattaaagctgtttctttctttatggaagaatgt
aaacgaatgggattagaagttttgggtccagatttaaatgaatcttaccttaaattttct
gtaaataaagatggagctgttcgttttggaatggccgctgttaaaggtgttggtgctgct
gctgtaagagccataattaaagagcgcacagaaaacggaaattacacttctatctttgat
ttagctaaacgtgttgatttaagagctgctaataaaaaatctttcgatagtttaattaaa
gcaggtgctttcgattcatttacagatacacatagagcacaatattttgctactgatgaa
aaaggattgactttcttagagcgtgctatgaaatttggtagtaaatatcaagaaaacaaa
aattctgcacaggtttctatgtttggtgaagcgtcaacagttcagtttcctgaaccagat
attcctgagtgtgaaacttggggaaccatggaacttttatcccaagaaaaagaagttatt
ggtatttatatttctgcacatcctttagatgattttaaaaacgaaatgattttttgtaat
gcatctttaaaatattttaaagaagatttggccaaatatgtgggtatgaatttgtctttt
gcaggtattattacagatgtgcaacacagagtttctaaagctggtaaaggttgggcaatg
tttactatagaagattatggagatagtaatgagtttagaatttttggtgaagattactta
aaaatgaaacactttttagtacccaattctttcttgtttgttcgagcaacaattcaacct
ggttggacaaacaaagaaggtgttactggcgaaccaagattaaaatttacagaaatgaaa
ttattacacgatattatggatgagttgtgtaaaaaactaaccattaaaatttctgttgat
gatataactgaggaaaccattgctaaccttcagagaattcttagaacaaatggtggtaag
cagtctttaaaatttaccatttgggatgctaaagaaaaaattgaagtaaacttacctagt
agaaatacaaaagttaatgtttctaatgagttattggctacacttcaaaaccaacaaatt
aactataaattgaattaa
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