Polaribacter reichenbachii: BW723_12940
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Entry
BW723_12940 CDS
T04692
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
prn
Polaribacter reichenbachii
Pathway
prn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW723_12940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prn03019
]
BW723_12940
03400 DNA repair and recombination proteins [BR:
prn03400
]
BW723_12940
Enzymes [BR:
prn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BW723_12940
Messenger RNA biogenesis [BR:
prn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW723_12940
DNA repair and recombination proteins [BR:
prn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BW723_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
HTH_40
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
APZ47133
UniProt:
A0A1B8TZZ7
LinkDB
All DBs
Position
3036591..3038774
Genome browser
AA seq
727 aa
AA seq
DB search
MDLHSPLKKFFGFNKFKGLQEEVIKSIVSNHNTFVIMPTGGGKSLCYQLPALMAEGTAIV
VSPLIALMKNQVDAIRGISEHNGVAHVLNSSLNKTEVAQVKDDIANGITKLLYVAPESLI
KEEYVTFLRTQKISFVAIDEAHCISEWGHDFRPEYRNLKHIIKAIDSVPVICLTATATEK
VQEDILKTLGITDANRFKASFNRANLFYEVRPKTKEVEKDIIRFVKQREGKSGIIYCLSR
KKVEEVAQVLQVNGINAVPYHAGLDAKTRVKHQDMFLMEDCDVVVATIAFGMGIDKPDVR
FVIHHDIPKSLESYYQETGRAGRDDGEGYCLAFYAYKDIEKLEKFMSSKPVAEQEIGHAL
LQEVVGYAETSMNRRKYLLHYFGEEFDEVNGEGADMDDNSRNPKKKHEAKEDVVIILKVV
KETLQKYKAKEVVNTIVGKENALLTSHKTHLQPFFGVGKDKTASYWMALIRQILVVNFIK
KEIEQYGVIKLTEDGKNYLKKPTSFMMTEDHSYHEGDDNSIITNSKSSGGVSDDKLVKLL
KDLRKRVAVKQGVPPFAVFQDPSIDDMALKYPITLDELSKVHGVGEGKARKFGKDFVKII
ATYVEENDVLRPDDLIVKSTGVNSGLKLFIIQNTDKKLPLEDIAKSKGLEMSDLIKEMER
IIFAGTKININYALDDLLDEDQQEEIHDYFMEAETDRIQDALDEFDGDYDDEELRLMRIK
FINEVGN
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggatttacatagtcctcttaaaaaattctttggttttaataaatttaaaggattacaa
gaagaagtaataaagagtattgttagcaatcataatacttttgtaataatgccaacagga
ggaggaaagtctctttgttatcaactgccagctttaatggcagaaggtactgcaatagtg
gtttcacctttaatcgctttgatgaaaaatcaagtagatgctataagaggtatttctgaa
cataatggagtagcacatgtgttaaattcatcattaaataaaacagaagtagctcaggtt
aaagatgatattgcaaacggaattactaaactattatatgttgcaccagaatctttaata
aaagaagaatatgttacttttttaagaactcaaaaaatttcttttgtagctattgatgaa
gcacattgtatttctgaatggggtcatgattttagaccagaatacagaaatttaaagcat
attattaaagctattgatagtgtacccgtaatttgtttaacagcaacagcaacagaaaag
gtacaagaagatattttaaaaacgcttggtataacagatgcaaatcgttttaaagcctct
tttaatagggctaatttattttacgaagttagacctaaaactaaagaggttgaaaaagat
attattcgttttgtaaaacaaagagaaggcaaatctggaattatttactgtttaagcaga
aaaaaagttgaagaagttgcccaagttttgcaagttaacggcataaatgcagtgccatat
catgctggtttagatgccaaaacaagagtgaaacatcaagacatgttcttaatggaagat
tgtgatgttgttgtggcaacaattgcttttggtatgggaatagacaaaccagatgtacgt
tttgtaattcatcatgatatacctaaaagtttagaaagttattatcaagaaacaggtaga
gcaggtagagatgatggagaaggatattgtttggctttttatgcctataaagatattgaa
aagttagagaaatttatgtctagcaagccagtagcagaacaagaaattggtcatgcatta
ttgcaagaagtggttggttatgcagaaacatctatgaatagacgtaaatatctgttacat
tattttggtgaggaatttgatgaagtgaatggggaaggtgcagatatggatgacaattct
agaaaccctaagaaaaaacacgaagcaaaagaagatgttgttataattttaaaagttgta
aaagaaacattacaaaaatataaagctaaagaagttgttaataccattgttggtaaagaa
aatgctttattaacatcgcataaaacacatttacaaccattttttggtgttggtaaagat
aaaacggcatcttattggatggctttaattcgccagatattggtagttaatttcattaag
aaagaaattgaacaatatggcgttataaaattaactgaagatggtaaaaattatttaaag
aaaccaacttcttttatgatgacagaagatcattcttatcatgagggtgatgataattct
attattacaaactcaaaatcttcaggtggagtttctgatgataaattagtaaaactactt
aaggatttaagaaaaagagttgctgtaaaacaaggtgtaccaccttttgctgtttttcaa
gatccgtctatagatgatatggctttaaaatacccaattactttagacgaattatctaaa
gtgcatggagtaggagaagggaaagctagaaaatttggtaaagactttgtaaaaattata
gctacttatgtagaagagaatgatgttttaagaccagatgatttaattgtaaaaagtaca
ggtgtaaattctggtttaaagttatttattattcagaatactgataaaaaattaccttta
gaagatattgctaaatctaagggtttagagatgagtgacttgattaaggaaatggaaaga
attatttttgctggtacaaaaataaatatcaattacgctttagatgatttgttagatgaa
gatcagcaagaagaaattcacgattattttatggaagccgaaactgatcgaattcaagat
gctttagatgagtttgatggtgattatgatgatgaggaattgcgtttaatgcgaattaaa
tttattaatgaagtaggaaattaa
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