Polaribacter reichenbachii: BW723_13450
Help
Entry
BW723_13450 CDS
T04692
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
prn
Polaribacter reichenbachii
Pathway
prn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
prn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BW723_13450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
prn03019
]
BW723_13450
03009 Ribosome biogenesis [BR:
prn03009
]
BW723_13450
Enzymes [BR:
prn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BW723_13450
Messenger RNA biogenesis [BR:
prn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BW723_13450
Ribosome biogenesis [BR:
prn03009
]
Prokaryotic type
rRNA helicases
BW723_13450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
RecG_N
Helicase_RecD
YbjQ_2
Motif
Other DBs
NCBI-ProteinID:
APZ47226
UniProt:
A0A1B8U1C3
LinkDB
All DBs
Position
complement(3160321..3162132)
Genome browser
AA seq
603 aa
AA seq
DB search
MSTFLELGLKEPISKALIDLGYEKPTVIQEKAIPQIIASTDDLKAFAQTGTGKTAAFSLP
ILELLDENNSNVQAIILSPTRELAVQIGNNIKDFSKYQKNVKVTTVYGGSSMEEQIRSLK
KGSQIVVGTPGRTVDLINRRALKLGNVQWLVLDEADEMLNMGFKEELDKVLEATPETKQT
LLFSATFPREVEAIARNYMTKPVEVTSGEKNSGSENVEHEYYAVTERTRYPALKRIADLN
PDIYAIIFCRTRRETQEVADNLIKDGYNADSLHGDLSQAQRDSVMGKFRKKTIQILVATD
VAARGLDVTELTHVINHKLPDQIENYTHRSGRTGRAGNKGISIVLVNGKEKGKLRVIERI
IKKKFVEGKVPTGKEIVQNQLMNLIDKVQKTEVNESEINEFLPSIYDKLADLDREELIQK
FVSLEFNSMLAYYENAKDLNDLGRETSRKRSTADNMTRFFINIGRKDSLNPAKLIGLIND
QEIGDKIEIGAIDILDTFSFFEIDKNFEDKTLEAFSSNQPDFDGRSVNVEITKKERSGGG
RRGGKKPFGKKDGGFGRRRSSENSSRGSSDDGGRKRTDRRSSDRPKNSGDRKSGGFGRRR
RER
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacatttttagaattaggcttaaaagagcctataagtaaagcattaatagattta
ggttacgaaaaacctactgttattcaagaaaaagcaatacctcaaataattgcatctaca
gacgatttaaaggcttttgcacaaactggtacaggtaaaactgctgcctttagtttacca
attttagaacttttagatgaaaacaatagcaatgttcaagctattattttatcaccaacg
agagaattagcagtgcaaattggtaacaacattaaagatttttctaaataccagaaaaac
gttaaagtaactactgtttatggtggttctagtatggaagagcagattcgttctttaaaa
aaaggatctcaaattgtagttggtactccaggtagaactgtagatttaattaacagaaga
gctttaaaattaggaaacgttcagtggcttgttttagatgaagctgatgaaatgttaaat
atgggttttaaagaagaattagataaagttctagaagcaaccccagaaacaaaacaaacc
ttattattttctgcaacatttcctagagaagtagaagcaattgcaagaaactatatgaca
aaaccagttgaagttacttctggtgaaaaaaattctggttcagagaatgtagagcacgaa
tactatgcagttacagaaagaactcgttacccagctttaaaaagaatagcagatttaaat
ccagatatttatgcaattatcttttgtagaactcgtagagaaacacaagaagttgcagac
aatttaataaaagacggttataacgcagattctttacatggagatctatctcaagcacag
agagattctgtaatggggaaattccgtaaaaaaacaattcagattttagtagctacagat
gttgctgcccgtggtttagatgtaaccgaattaacgcacgtaatcaatcataaattacca
gatcaaatagaaaactacacacacagaagtggtagaactggtagagctggtaataaaggt
atatcaatagtattagttaacggaaaagaaaaagggaaactacgtgttattgaaagaatc
attaaaaagaaatttgtagaaggtaaagtacctacaggtaaagaaattgtacaaaatcaa
ttaatgaatttaattgataaggttcaaaaaactgaagttaacgaatctgaaatcaatgaa
tttttacctagtatttatgataaattagctgatttagatagagaagaattaatccaaaaa
ttcgtttctttagaatttaactcaatgttagcgtattacgaaaacgctaaagatttaaat
gatttaggtagagaaacttcaagaaaaagatctactgcagataatatgactcgctttttt
atcaatattggtagaaaagacagcttaaaccctgcaaaattaatcggtttaatcaatgac
caagaaattggtgataaaattgaaattggtgcaatagatattttagataccttctctttc
tttgagattgataaaaacttcgaagacaaaacattagaagcattttctagtaatcaacca
gattttgatggacgctctgttaacgtagaaattacgaaaaaagaacgttcaggtggagga
agaagaggtggtaaaaaaccttttggtaaaaaagatggtggttttggaagaagaagaagt
tctgaaaattcatctagaggaagtagtgatgatggaggaagaaaaagaactgacaggcgt
tcttctgacagacctaaaaattcaggcgatagaaaatctggaggttttggtcgaagacgt
agagaaagatag
DBGET
integrated database retrieval system
