Prevotella sp. oral taxon 299: HMPREF0669_00303
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Entry
HMPREF0669_00303 CDS
T02809
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pro
Prevotella sp. oral taxon 299
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_00303
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HMPREF0669_00303
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA_22
AAA
AAA_16
GvpD_P-loop
AAA_14
nSTAND3
AAA_5
DUF7129
AAA_29
Motif
Other DBs
NCBI-ProteinID:
EFC71631
UniProt:
D3IA49
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All DBs
Position
unnamed:complement(545214..546623)
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AA seq
469 aa
AA seq
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MVKDKIAYVCSTCGFDSAKWIGKCPACGEWNTFKEFRLGSNSKKATSRSTIASSTHHLAS
QENKPLRLNEISGSEAPRISMNDGELNRVLGGGLVRGSITLLGGEPGIGKSTLTMQTLLS
LSHLKVLYVSGEESAYQLKMRAERLSKGLKETSIDHDNLIILCETSLETIFEQIINIQPE
LIIIDSIQTISTEQVESSPGSITQVRECSSQLLRFAKTTNTPVLLIGHINKEGTFAGPKV
LEHIVDTVIMFEGDQHHIYRILRATKNRFGSTSELGIYEMRDTGLRQVENPSELLLSQDL
SGLSGVAISCAIEGARPLMLETQALVSTAAYGTPQRSATGFEQRRLNMLLAVLEKRVGFK
LMQKDVFLNIAGGLRVTDLAMDLSVIVSVLSSNVDTPIDVGWCMAGEVGLSGEVRTVSRI
EQRISEAEKLGFTHMIIPQNNLQGFDVKKYSIQLHPVKKVEEALRILFG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagacaaaattgcttatgtttgttcaacttgtggtttcgactcagcaaagtgg
attggcaagtgtcctgcgtgtggagaatggaacacttttaaagagtttaggctcggaagt
aacagcaaaaaagcaacaagcagaagcacaatagcaagtagcacacatcaccttgcaagt
caagagaataagcctttgcgcttaaatgaaatatcgggaagcgaagcgccacgcattagt
atgaacgatggggaactaaatcgtgttcttggaggtggacttgtaagggggtctatcact
ctacttggcggagaaccaggaattggaaagagtactcttaccatgcaaactcttttgtct
ttgtctcaccttaaagtgttatatgtaagcggtgaagagagtgcttaccaactaaagatg
cgtgccgaacgtttatctaaaggcttaaaggaaacttctatcgaccatgataaccttatt
atattatgtgaaacatcattggagacaatctttgagcagatcattaacattcaaccagag
ttgataattatagattctattcaaactatttctaccgaacaagtagaaagtagcccagga
agtatcacacaagttagagaatgttcgtcacaactcctgcgttttgcaaagacaactaac
acgccagttcttctcattggacacatcaataaagaaggaactttcgcaggtcccaaggta
cttgagcatatcgttgatacggttattatgtttgaaggtgaccaacatcacatttataga
atacttagagccactaaaaatagattcggaagtacctctgaactgggtatatatgagatg
agagatacagggcttcgccaagtagaaaatccatcggagctacttttatcgcaagatctt
agtggtttatcaggtgtcgccatcagttgtgcaattgagggtgcacgacctttaatgctt
gaaactcaagcattagtgtcaactgctgcttatggaactccacagcgttctgcaacgggt
tttgagcagcgtaggctcaatatgctattggctgtgcttgaaaaacgtgtgggatttaaa
ctaatgcaaaaagacgttttccttaatattgctggtggtttgcgtgtaaccgatttagca
atggacctcagtgttattgtgtctgtattatcaagtaatgtagatacaccgatagatgtg
ggttggtgtatggctggagaggttggacttagcggtgaagtacgcacggttagtagaata
gagcaacgcatttctgaagcagaaaagcttggatttacacacatgattatacctcaaaat
aatctacaaggattcgatgtgaagaaatattctatacaacttcacccagtaaagaaggta
gaagaggctttaagaatattatttggataa
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