Prevotella sp. oral taxon 299: HMPREF0669_00338
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Entry
HMPREF0669_00338 CDS
T02809
Name
(GenBank) chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0669_00338
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pro03019
]
HMPREF0669_00338
03110 Chaperones and folding catalysts [BR:
pro03110
]
HMPREF0669_00338
03029 Mitochondrial biogenesis [BR:
pro03029
]
HMPREF0669_00338
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pro04147
]
HMPREF0669_00338
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HMPREF0669_00338
Messenger RNA biogenesis [BR:
pro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HMPREF0669_00338
Chaperones and folding catalysts [BR:
pro03110
]
Heat shock proteins
HSP60 / Chaperonin
HMPREF0669_00338
Mitochondrial biogenesis [BR:
pro03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HMPREF0669_00338
Exosome [BR:
pro04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HMPREF0669_00338
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0669_00338
Exosomal proteins of breast cancer cells
HMPREF0669_00338
Exosomal proteins of colorectal cancer cells
HMPREF0669_00338
Exosomal proteins of bladder cancer cells
HMPREF0669_00338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
ARM_KNTC1_3rd
Motif
Other DBs
NCBI-ProteinID:
EFC71666
LinkDB
All DBs
Position
unnamed:587297..588925
Genome browser
AA seq
542 aa
AA seq
DB search
MAKEIKFNIDARDLLKRGVDQLADAVKVTLGPKGRNVVIEKKFGAPLITKDGVSVAKEIE
LEDKFENTGAQLVKSVASKTGDDAGDGTTTATILTQAIVTEGLKNVTAGANPMDLKRGID
KAVKTVVDYIKTNSEQVGDNYDKIEQVATVSANNDPEIGKLLADAMRKVSKDGVITIEES
KSRETYINVVEGMQFDRGYLSGYFVTDSEKMECVMDNPYILIYDKKISNIKDFLPILQPA
AETGRPLLVIAEDVDSEALTTLVVNRLRAGLKICAVKAPGFGDRRKAMLEDIAILTGGTV
ISEEKGLKLEQATLEMLGTAEKVTIDKENTTIVNGAGSKESIQDRVSQIKNEIASTTSSY
DKEKLQERLAKLAGGVAVLYVGANSEVEMKEKKDRVDDAFYATRAAIEEGVVAGGGSTYI
HALDALKELKGDNQDEQTGINIVERAIEEPLRQIVANAGGEGAVVVQKVREGKNDFGYNA
RTGVYEDLRKAGVIDPAKVSRVALENAASIAGMFLTTECIIVDKPEENAMPAMGQPGMGG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagaaattaaattcaatatagatgcacgtgacctcttaaaacgtggtgtagac
caacttgcagacgctgtaaaagtaacactaggtcctaaaggtcgcaatgtagttatcgag
aaaaagtttggtgctccacttattactaaggacggagtgagtgttgcaaaggagattgaa
ctagaggataagtttgagaatactggtgctcaacttgttaaaagcgtggcaagtaaaact
ggagatgatgctggagatggtacaacaacagcaactattttgactcaagcaattgttact
gaggggctaaagaacgtaactgcaggtgctaaccctatggatcttaagagaggaattgat
aaggctgtgaagacagttgttgattatattaaaactaactcagagcaagttggagacaac
tacgataagattgaacaggttgcaacagtttcagcgaacaatgatcctgaaataggtaaa
ttgcttgcagatgcaatgcgtaaggtaagtaaggacggagtgattactattgaagaaagt
aaaagccgtgaaacttatatcaatgtagttgaaggtatgcagtttgacagaggttatctc
tctggttatttcgtaacagactctgaaaaaatggagtgtgttatggacaatccatacatt
cttatttatgataaaaagattagcaacataaaagatttccttccaattcttcaaccagca
gcagaaactggcagacctttattggtgattgcagaggatgttgatagtgaagctttaacc
actttggtagtaaaccgcctacgtgcaggtttgaagatttgcgcagttaaggcaccaggt
tttggtgatcgtcgtaaagcaatgcttgaagatatcgcaatattaactggtggaactgtt
ataagtgaagagaagggattgaagcttgaacaagctactcttgaaatgttaggtactgca
gagaaggtaactatcgataaagagaatactaccatcgtaaatggtgcaggctcaaaagaa
agtattcaagaccgtgttagccaaataaagaatgaaattgcaagcacaacaagctcttat
gataaagagaaattacaagaaagacttgctaaattggcaggtggtgtagctgttctttat
gtcggtgcaaatagcgaagttgagatgaaagaaaagaaagatcgtgtagatgatgctttc
tatgcaactcgtgcagctattgaagaaggtgttgttgcaggtggtggttcgacttatatc
catgctcttgatgcactaaaagaacttaagggagataatcaagacgaacaaacaggtatc
aatatcgttgagcgtgcaatcgaagaaccattgcgtcagattgttgctaatgctggtgga
gaaggtgctgtcgttgttcaaaaggtgcgtgaaggtaagaatgacttcggatataatgca
agaacaggtgtttatgaagacctacgtaaggctggagttatcgatcctgcaaaggtttct
cgtgtggctttagagaacgcagcatcaattgctggaatgttcttaacaactgaatgtatt
atagttgataagccagaagaaaacgcaatgcctgcaatgggacaaccaggaatgggcgga
atgatgtaa
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