Prevotella sp. oral taxon 299: HMPREF0669_00341
Help
Entry
HMPREF0669_00341 CDS
T02809
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0669_00341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pro03019
]
HMPREF0669_00341
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_00341
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0669_00341
Messenger RNA biogenesis [BR:
pro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF0669_00341
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HMPREF0669_00341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Cas3-like_C_2
HEM4
rpo30_N
Motif
Other DBs
NCBI-ProteinID:
EFC71669
UniProt:
D3IA87
LinkDB
All DBs
Position
unnamed:complement(590852..592759)
Genome browser
AA seq
635 aa
AA seq
DB search
MQLTRHKEILQEYWGYTSFRGIQEDIITSICDKKDTLGLMPTGGGKSITFQVPALLLEGT
CIVITPLIALMKDQVQNLRKRSITAVAIHSGMSRQEVITTLDNCILGNIKLLYVSPERLS
SDFFKKKLQHIKVSFITVDEAHCISQWGYDFRPSYLNIAEIRQLIPNTPILALTATAPPL
VIKDIQQQLHFKEENIFKMSFERKNLAYIVRETNGKEEELMHILNSVNGSAVVYVRSRLR
AKEVSKLLNENGIHSTFYHAGLEHSVKDKHQAAWQNSEVRVMVATNAFGMGIDKSDVRLV
IHIDCPDSIEAYFQEAGRAGRDGNKAWAVLLYNDSDERKLNKRIATSFPEKDYIKQVYAH
LAYFFQVAYGTGRGRTFVFDIDKFCRVFKHFPAQLQSALTILMRAGYIEFEHDPDASSRA
IFLLQRNDLYLLQSLSPKEDLVITTLLRLYGGLFIDYVYIDEDLISERSGLTRKEIYLLL
KGLSQRHILHYIPQKKIPYITFLCERADPNKLIIPPEVYERRKEQFSLRIKSVITYAKYH
DVCRSRQLLRYFGEERSHDCKQCDVCLEHLEDPNFKTSIDHAIMEIKDLLSDGKEHIITD
LYKINIPERYLFEALTYLSNEEWLTSIDGYIKKND
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgcaactaacccggcataaagagattctccaagaatattggggatatacgagttttaga
ggcattcaagaagatatcatcaccagtatctgtgataaaaaagatacattaggattgatg
cctacaggtgggggtaaatctattacctttcaagttcctgccttattattggaaggaaca
tgcatagttataactccactcattgcattaatgaaagatcaagtacagaacttacgcaaa
agatctataactgcagttgcaattcattctggaatgtctcgccaagaggttattactaca
ctcgataattgtatcttagggaatataaagttgttgtatgtatctcccgaacgtttatct
tcagacttctttaaaaagaaacttcaacacataaaagttagcttcataactgtcgatgaa
gctcattgtattagtcaatggggatatgattttcgcccttcttacttaaatattgcggag
attcgccaattaatacccaacactccgatacttgctttaactgcaactgctccccctttg
gttataaaagacattcaacagcaattacattttaaagaagaaaatatctttaaaatgagt
tttgaacgaaagaacttggcatatattgtccgcgaaacaaatggcaaggaagaagaacta
atgcatattctgaactctgttaatggtagtgctgtggtgtatgtgagaagtcgtttaaga
gcaaaggaagtgtcgaagttacttaacgagaacggaatacactctactttctatcatgct
ggactggaacacagcgtaaaagacaagcaccaagcagcctggcaaaacagcgaagtgcgt
gtaatggttgctacaaatgcgtttggaatgggaattgataaaagcgacgtacgactcgtt
atacatattgattgccccgattctatagaagcttactttcaagaagcaggtagagcaggt
agagatggcaataaagcatgggcagttttgttgtataacgatagtgatgagcgcaaacta
aataaacgaatagctacttcttttcctgaaaaagattatataaaacaggtttatgcacat
ttggcttacttctttcaagtagcctacggaactggaagaggacgcacttttgttttcgac
atcgataagttctgtagagtatttaaacattttcctgctcaattacaatctgctcttact
atccttatgagggctggttatattgaatttgaacacgaccctgatgcctcgtctcgtgct
atcttcttgctacaacgcaatgatctatatctacttcaaagtctttcacccaaagaagac
cttgtcattacaactttattaaggttatatgggggtttatttattgattatgtttatata
gatgaagatcttatttctgagcgttctggcttaactcgtaaagagatatatcttttatta
aaaggcttaagtcagcgacatatcttacattatatccctcaaaagaagataccttacatc
acttttctttgtgaaagagctgatcccaacaaactaattatacctcctgaagtatatgaa
agaagaaaagagcaatttagtttacgcataaaatcagttataacttacgctaagtatcac
gatgtttgccgtagtagacagcttcttcgatactttggtgaagaacgttctcacgattgt
aaacaatgtgatgtatgtcttgaacacctcgaagatcctaattttaaaacctctatagat
catgctataatggaaattaaagatctattaagcgatggtaaagagcatattatcactgac
ttatacaagataaatatcccagaaaggtatctttttgaagctctaacttatttatctaat
gaagaatggctcacttctattgatggatacataaagaaaaacgattaa
DBGET
integrated database retrieval system
