Prevotella sp. oral taxon 299: HMPREF0669_00542
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Entry
HMPREF0669_00542 CDS
T02809
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pro
Prevotella sp. oral taxon 299
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pro03009
]
HMPREF0669_00542
Enzymes [BR:
pro01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
HMPREF0669_00542
Ribosome biogenesis [BR:
pro03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HMPREF0669_00542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
TRM5-TYW2_MTfase
Methyltransf_15
Methyltransf_25
MTS
N6_N4_Mtase
PrmA
PCMT
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
EFC71870
UniProt:
D3IAT8
LinkDB
All DBs
Position
unnamed:850944..852365
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AA seq
473 aa
AA seq
DB search
MSRKKKQLPLLENITITDVAAEGKALARVDDMVIFIPFVIPGDVVDVQITKKRKSYCEGR
VVRFIQYSDNRKEPFCPHFGICGGCKWQILPYEDQLKAKHQQVYDQLSRIGKIELPEFNY
ILGSVQTMQYRNKLEFGCSNKRWLTQEDIDSKKTFDNMNAIGFHITGAFDKIYPITQCQL
MDDLQNQIRNHIYEYAIKQNISFYDLRNQHGLLRSIMVRNSNNNEWMVLVQFRFDQSNDK
EKALALLEDLSNHFPQITSLLYVDNQKCNDTFSDLTVEVYKGNNYIYELMEDLKFKVGPK
SFYQTNTEQAYHLYDVTRKFAGLTGNELVYDLYTGTGTIANFVAPKAKKVIGIEYVPEAI
KDAKVNSQINNINNTLFYAGDMKDILSQEFIEEHGRPEVIITDPPRAGMHPDVIQTILSA
APNRIVYVSCNPATQARDLADFNKDYKVTAVQPVDMFPHTPHVENVVLLERRA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaagaaaaaacaattaccattattagagaatatcacaataacagacgttgct
gctgaaggaaaagcattggcacgagtagacgatatggttattttcattccattcgtaata
cctggagacgttgttgatgtacagataacaaagaaaagaaagagttattgtgaaggtcga
gttgtacgctttattcaatatagcgataacagaaaagagcctttttgtcctcattttggt
atttgtggcggatgcaaatggcaaatacttccttacgaagaccagcttaaagccaagcat
caacaagtatacgaccaactttctcgtattggaaaaatcgaacttccagagttcaattac
attctaggatcagtgcaaacaatgcaatatcgcaataaattagagttcggttgttctaac
aaaagatggttaactcaagaagatatcgactctaagaagacctttgataatatgaatgct
attggttttcatatcactggagccttcgataaaatatatcctatcacccaatgtcaactc
atggatgatctacaaaaccaaataaggaaccacatctatgagtatgcgatcaagcaaaat
atttctttttacgatctaagaaaccaacacggactattaagaagcattatggttagaaac
tctaacaataatgaatggatggtacttgtgcagtttagatttgaccaaagcaatgataaa
gaaaaggcattagcacttcttgaagacctttctaaccactttccacaaataacttcattg
ttatacgtagacaatcagaagtgcaacgacacgtttagcgacttaactgtggaagtgtat
aagggcaataattatatctatgagttgatggaagaccttaaatttaaggtgggaccaaag
agcttctatcaaactaataccgagcaagcttatcatctttacgatgtaacccgtaagttt
gcaggactcacaggcaatgagttagtatatgatttatatactggaacaggtacaattgca
aatttcgttgctcctaaagctaagaaagtcattggtatagagtatgtccctgaggctatt
aaagatgcgaaagtaaatagtcaaatcaataatattaacaacactttgttctatgctggc
gacatgaaagatatcttatctcaagagtttatcgaagagcatggacgccctgaggtgatc
attaccgacccaccaagagcaggaatgcaccctgatgtaattcaaactatcttatctgca
gcccctaaccgcattgtatatgttagttgtaatccagctactcaggccagagatttggca
gacttcaacaaagactataaggtaactgctgtgcaacctgttgatatgtttccacatact
ccacacgttgagaatgttgttttacttgaaagaagagcataa
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