Prevotella sp. oral taxon 299: HMPREF0669_00649
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Entry
HMPREF0669_00649 CDS
T02809
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03420
Nucleotide excision repair
pro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HMPREF0669_00649
03430 Mismatch repair
HMPREF0669_00649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_00649
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HMPREF0669_00649
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HMPREF0669_00649
MMR (mismatch excision repair)
Other MMR factors
HMPREF0669_00649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
RNase_T
AAA_19
UvrD_C_2
Viral_helicase1
DEDDh_C
AAA_12
DNA_pol_A_exo1
Rv2179c-like
AAA_11
Myb_DNA-bind_8
Motif
Other DBs
NCBI-ProteinID:
EFC70944
UniProt:
D3IB45
LinkDB
All DBs
Position
unnamed:1477901..1480591
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AA seq
896 aa
AA seq
DB search
MNTSFIPDSDQQRVIDIEEGDALVFAPPGCGKTQILTLRLQKALLHGVRPQDMLCLTFTN
RAARGMLERIQSNIDLPQALEVFVGNVHRYCSKFLFEENIIPAGSSIIDDDDAISILSGY
LEQEEQGVSSNPTLRRSYFSCVQLAAFIFQLKSNHPKELRLHPDCITAEDVTALRYLCQQ
LRINFSASTMIDIFDHSKRYADALENPLFDYGMAKLLKSFFKRIDIANYYASYKNENQLY
DFEDLLMLTYNAYTSPSANEYRHYSWVQIDEVQDLNALQLAIIDAITTKEQRSVVYLGDE
QQAIFSFMGAKLSTLSVLKERCKGHIYHLHTNHRAPSYLVKVLNTFAQHQLHIAPELLPS
TLKETQQIGDELKIITSGTLEEELRDTALLAQKLLNDHPNETTSIIVSSNADADKISEEL
KTQHIPHFKVSGQDLFSTPLVKLLIAHLGVIANEHNFIAWSRILKGLKIFSTNAASQRFV
RLLNERAISVSDLLNDAPSTYVERFVRHYEQDTLVVFDTETTGLNVLEDDIVQIAAVKIA
KGKVLENERFEIFIDTKRPIPAMLGDIENPLIEEIKKHTLHTPAEALARFMEYIDGAMLV
GHNATYDYQILYNNLLRYLPQYTFLQKHSSYIDTLKLTRLLQPSLKNYKLKNLLQEFQLE
GQNTHLADADVHATVGLVHFCYQQSVEKLKGQSEFLAHPKVDAKVQKLKRLYGDIYRQAQ
QELWKKQDTTQSSALISQLVWFYNQVVEAEIMKPLSATEYVFNYIENEMVDKHAENCLAQ
QLFLHVNEIATLKEADLCGSSIIHEKIFISTIHKAKGLEFDNVIVYDVAEGRYPNYFIKD
NPELVLEDARKFYVALSRARKRLWMIYASTKIGYYNNPTPRYLTRFMNSIASLFGS
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgaatacttctttcataccagatagcgaccaacagcgtgttatcgacatcgaagaaggc
gacgctttggtgtttgctccgcctggatgtggaaagacacagatacttactttgcgtcta
caaaaagcacttttacatggtgttcgtccgcaagatatgctctgtttaacattcacaaac
cgagcagcacgaggcatgttagaacgtattcagagcaatatcgacttgccacaagccctc
gaagtgtttgtaggaaacgtgcatcgttattgttcaaagtttcttttcgaagagaatatc
atccctgctggctcctcaattatcgacgacgatgatgcaatctccattctttctggttat
ttagaacaggaagaacagggcgtaagtagcaatccaacgctccgccgttcctatttctct
tgcgttcaactggccgctttcatcttccaattaaagagcaatcaccccaaagaattgcgc
cttcaccccgattgtatcactgccgaagacgtcacagcattgcgctatttgtgccaacaa
ttgcgcataaacttctccgcttcgaccatgattgacatcttcgatcatagtaaaagatat
gccgatgcactcgaaaatccgctgttcgactatggtatggcaaagctgttaaagtcgttt
ttcaagcgaatagacattgccaactattatgcaagttataaaaatgagaatcagttatac
gatttcgaagacttgttgatgctcacttataatgcttacacctcgccttctgccaacgaa
tatcgtcattattcgtgggtacaaatcgacgaagtgcaagacttaaacgctttgcaattg
gccattattgatgccatcaccaccaaagagcaacgttctgtggtgtatttaggcgacgaa
cagcaagccatcttttcgtttatgggagccaaattaagtactctttcagtactaaaagag
cgttgcaaagggcacatttaccatttacacaccaaccaccgagcaccctcttatttggta
aaagtgctcaacaccttcgcccaacatcagctacatatcgccccagagttacttccttct
accctaaaagaaacccaacaaataggcgatgaactaaagattatcacctcaggaacgtta
gaagaggagctaagagacaccgccttgttggctcaaaaactactcaacgatcacccaaac
gaaaccacttcgattatagttagctcgaatgccgatgccgataagataagcgaagagttg
aaaactcaacatattccgcattttaaagtgtcgggacaagatttgttttccactccactt
gtcaagttgttaatagctcatttaggcgtaattgctaatgaacacaatttcattgcgtgg
tcgagaatattgaaaggactcaaaattttcagtaccaatgcagcctctcagcgtttcgtt
cgcttgttaaatgaacgggcaataagcgtttccgacctactaaacgatgcgccttcaacc
tacgttgaacgctttgttcgccactatgaacaagacactttggtggtgttcgacaccgaa
acaacgggcttaaacgtgttagaagacgacattgtgcagattgcagccgtgaaaatagca
aagggaaaggtactcgaaaacgagcgtttcgaaatttttatcgacaccaaacgacccatt
cctgcaatgcttggcgacatcgaaaatccacttatcgaagaaatcaaaaagcacactttg
cacacaccagcagaggctttggctcgctttatggagtatattgatggcgcaatgctcgtt
ggtcacaacgcaacatacgattatcaaattctttataacaatcttttaagatatctacct
caatacactttcttgcaaaagcattcttcttacatcgatacattaaagcttacacgcctt
cttcagccctctttgaagaactataagctcaagaatttgttgcaagagtttcaacttgag
gggcaaaacacgcaccttgccgatgccgatgtgcatgccactgttggattggtgcatttt
tgttatcaacagagcgtagagaagttaaaagggcaaagtgagttccttgcccacccaaag
gtcgatgcaaaggttcaaaagttaaagagattgtatggcgatatttatcgtcaggcacag
caagagctatggaaaaagcaagacacaacgcaatcttctgccctcatttcgcaacttgtt
tggttctataatcaagtggttgaggcagaaataatgaagcctttgagtgcaaccgaatac
gtatttaattatattgagaatgagatggtagacaaacacgcagagaattgtttagcgcaa
cagttgtttttgcatgtaaatgaaattgcaactctgaaagaagccgacctttgtggtagt
tcaattattcatgaaaagatttttatcagcaccattcataaggcaaaaggactcgagttt
gacaatgtaattgtgtatgatgtagccgaaggacgctatcccaattacttcataaaggat
aacccagagctggtattagaagacgcacgcaagttctatgtcgctctttctcgagcacga
aaacgactttggatgatttatgcctcaaccaaaataggctattataacaatcccactcca
cgctatctcacacgtttcatgaattcaatagcatcgctattcggatcttaa
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