Prevotella sp. oral taxon 299: HMPREF0669_00746
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Entry
HMPREF0669_00746 CDS
T02809
Name
(GenBank) RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMPREF0669_00746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pro03021
]
HMPREF0669_00746
Transcription machinery [BR:
pro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMPREF0669_00746
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
GerE
Sigma70_ECF
HTH_40
HTH_10
KORA
Motif
Other DBs
NCBI-ProteinID:
EFC71041
LinkDB
All DBs
Position
unnamed:1355777..1356322
Genome browser
AA seq
181 aa
AA seq
DB search
MNTSFKQLYLQYYAPAKRFATLYVKRSDVAEDIVQDVFLKIYELQKNTSQCNFPMAYIMT
SVKHGCISFLRGELLLTQFEGTYSEVERSEMQWMCHQLETWDLTTSLNEDAFSEIYKAID
ALPTQCREIFIRSKIEGKKHAEIAQELNISINTIESQMSIAYRKLRKSLEHFLFLLLLFL
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctcctttaaacaactatatcttcaatattatgcgcctgcaaaacgctttgca
acattgtatgtgaagcgaagcgatgtggcagaagatattgtgcaagatgtgttcttaaag
atttatgaactgcagaaaaacacatcccaatgcaactttcctatggcatatatcatgact
tctgtaaagcatggttgcatttctttcttgcgtggtgaactgcttttaacgcagtttgaa
ggtacttattcggaggtagaacggagcgaaatgcaatggatgtgccatcaacttgaaacg
tgggatttaaccacttcgcttaacgaagatgctttttctgaaatatataaggcgatagat
gctttgccaactcaatgtagagagatctttattcgtagtaagattgaggggaagaagcat
gctgaaattgcccaagagctgaacattagcatcaacacaatagagagtcagatgtctatt
gcctatcgaaaattgcgcaaaagtttagaacattttttatttcttttattgctttttcta
ccatag
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integrated database retrieval system
