Prevotella sp. oral taxon 299: HMPREF0669_00804
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Entry
HMPREF0669_00804 CDS
T02809
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HMPREF0669_00804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pro03019
]
HMPREF0669_00804
03009 Ribosome biogenesis [BR:
pro03009
]
HMPREF0669_00804
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HMPREF0669_00804
Messenger RNA biogenesis [BR:
pro03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HMPREF0669_00804
Ribosome biogenesis [BR:
pro03009
]
Prokaryotic type
rRNA helicases
HMPREF0669_00804
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Helicase_helical
DbpA
ResIII
CMS1
Cas3-like_C_2
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
EFC71099
LinkDB
All DBs
Position
unnamed:complement(1279843..1281753)
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AA seq
636 aa
AA seq
DB search
MLGISEEIRQAIEELGFEHPTPVQEEVIPYLLGEGNDVIALAQTGTGKTAAYGLPLIQKV
NPQQKHTQALILSPTRELCLQISDSLSDFSKYIKGLTVVPVYGGTSIETQIKALKKGTQI
IVATPGRLIDLIHRGVAKLENVTNVVLDEADEMLNMGFSESINEILECVPKDRNTLLFSA
TMSKEIERIARNYLTNHKEIVVGSRNEGAESVNHIYYMVNAKDKYLALKRIVDYYPSIFA
IIFCRTKRETQEIADKLIHDGYNAEALHGDLSQQQRDLTMQKFRKHTTQFLVATDVAARG
LDVDDLTHVINFGLPDDIESYTHRSGRTGRAGKKGTSISIMHTRERSKMHAIEKVISKAF
VEGEIPDAKAICSKQLYKVMDQILKADVNEEEIAPFLSEINRHFEYVDKEDIIKKIVSME
FGKFLEYYANAPIIEKPSRGRGEDRGSKGNRRDGSGQRRSGERRAPRAVESGFKRLFINL
GKADGFYPGEIMQFINKNVKGRQQVGHIDLLDKISYIEVPERDANKVMKALSGSIYKNRE
VRCNDAEEGSNGKKGRSTGGRNAGGDSDNRYEKRSRQRNSNGERRQGGRNSKGYNTERGE
ELGDWRQFFNEKKVNLRGEEPDFSEDGWARRKPKKK
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcattagcgaagagattcgccaagccatcgaagaattaggttttgagcatcca
acacctgtacaagaagaagttattccatatttattaggagaaggtaacgatgttattgca
cttgcacaaacaggaactggcaaaacagcagcatacggtttaccactcattcaaaaagtt
aatccacaacaaaagcacactcaagcactcatattatcacctactcgtgagctatgtttg
cagatttctgacagcttaagcgacttttctaaatatatcaaaggcttaactgtggtgcct
gtttatggtggtacatctattgaaacacaaattaaagcacttaaaaaaggtactcaaata
attgtagcaacaccaggacgactcatcgatttgattcatcgtggggtggcaaagctcgaa
aatgtaaccaatgttgtgctagatgaagccgatgaaatgttgaatatgggtttctctgaa
agcattaacgaaattttagagtgtgttcctaaagatagaaacactttgcttttctcggct
acaatgagtaaagaaatagagcgaattgcacgcaattatctcaccaaccacaaggaaata
gttgtaggaagccgtaacgaaggagccgaaagtgttaatcatatctactatatggtgaac
gcaaaggacaaatatcttgcactaaagcgcatcgtagactattatccaagcatctttgca
attatcttctgtcgcacaaaacgtgaaactcaagagattgccgacaagcttattcacgat
ggatacaacgctgaagcactgcacggagacctctctcaacaacaaagagacctcactatg
cagaaatttagaaagcatacaacgcagtttctcgttgcaaccgacgtggcagcacgtggc
ttagacgttgatgatcttacacatgttatcaactttggattgcccgatgacatcgaaagt
tacactcaccgaagcggaagaacaggtagagcaggtaagaaaggtacatctatttcgatt
atgcacacccgtgaacgcagtaagatgcacgccattgaaaaggtgattagcaaagctttc
gttgaaggagaaatacccgatgcaaaggcaatatgcagcaaacagctttacaaggtgatg
gaccaaatattgaaagcagacgtgaacgaggaagaaatcgcacctttcttgtcggaaatc
aatcgtcactttgaatacgtagacaaagaagatatcatcaaaaagattgttagtatggag
tttggtaaattccttgaatactatgctaacgctcctattatcgagaaaccaagtagagga
agaggcgaagaccgaggctcgaaaggcaacagaagagatggtagtggacaacgaagaagt
ggcgaacgccgtgcacctcgtgcagtagagtcgggatttaagcgtcttttcatcaaccta
ggaaaggccgatggcttctatccaggcgagataatgcaattcatcaacaaaaatgttaag
ggcagacaacaagttggtcacatcgatcttctcgacaaaatatcttacattgaggttcct
gaaagagacgcaaacaaggtgatgaaggctctaagcggaagcatttacaagaatagagag
gttcgttgtaacgacgcagaagaaggatctaacggcaaaaaaggacgctcaactggtggc
agaaatgcaggtggcgactcggacaatagatacgaaaaacgctcaagacaacgcaattca
aatggcgaaagacgtcaaggcggaagaaactctaaaggttataacactgaaagaggcgaa
gaattgggcgactggcgtcagttctttaacgagaaaaaggtgaacctaagaggtgaagaa
ccagactttagcgaggatggttgggcacgtcgtaaacctaaaaagaaataa
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