Prevotella sp. oral taxon 299: HMPREF0669_00889
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Entry
HMPREF0669_00889 CDS
T02809
Name
(GenBank) RNA polymerase sigma-70 factor, Bacteroides expansion family 1
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HMPREF0669_00889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pro03021
]
HMPREF0669_00889
Transcription machinery [BR:
pro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HMPREF0669_00889
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
GerE
Sigma70_ECF
PF0610-like_N
DUF1492
Motif
Other DBs
NCBI-ProteinID:
EFC71184
LinkDB
All DBs
Position
unnamed:1147433..1147966
Genome browser
AA seq
177 aa
AA seq
DB search
MQENLDKNIEKLFKETYPMLFCYAQKIVGYDDAEDVLEEVFLDICKRKDFIEIGDKINSF
LFRAVYTRCINILHRRNSVHGYIKLIEEVHQRQLDMLEDDHNKIIIEKLENNELGYILKK
KIEELPEKCRESFKMSYIYNMRNEDIADVLDVSIRTVESHIYHALKILRNELKQLKK
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaaaccttgataaaaacatagaaaaactatttaaagaaacctatcctatgctc
ttttgttatgcacaaaagattgtggggtatgatgatgctgaggacgtattagaagaagtt
ttcttggatatttgtaaacgcaaagattttattgaaataggagataaaatcaattctttt
ttatttcgagctgtatatactaggtgtattaatattttacataggcgaaattctgttcat
ggatatattaaattgattgaagaagtgcaccaacgccaattggatatgctcgaagacgat
cataataaaataattattgagaaacttgaaaacaatgaattgggttatattcttaaaaag
aaaatagaagaattgcccgaaaaatgccgagaaagtttcaaaatgagctatatctataat
atgagaaatgaagatatagccgatgtgttagatgtatctattagaacagtagaatcgcac
atttatcatgctcttaaaatattaagaaacgaactaaagcaattaaaaaaatag
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