Prevotella sp. oral taxon 299: HMPREF0669_01144
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Entry
HMPREF0669_01144 CDS
T02809
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pro
Prevotella sp. oral taxon 299
Pathway
pro03030
DNA replication
pro03430
Mismatch repair
pro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HMPREF0669_01144
03430 Mismatch repair
HMPREF0669_01144
03440 Homologous recombination
HMPREF0669_01144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pro03032
]
HMPREF0669_01144
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_01144
Enzymes [BR:
pro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HMPREF0669_01144
DNA replication proteins [BR:
pro03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HMPREF0669_01144
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HMPREF0669_01144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
tRNA_anti-codon
T2SSK
Cytochrom_C_2
Motif
Other DBs
NCBI-ProteinID:
EFC70689
UniProt:
D3ICJ0
LinkDB
All DBs
Position
unnamed:complement(1662104..1665814)
Genome browser
AA seq
1236 aa
AA seq
DB search
MEDFVHLHVHTYYSILDGQSNIQKLVDKAINNGMRGLAITDHGNMFGIKEFYNYCNKVNG
KRKEEGLPPFKPILGCEMYVARNKKESKIKENGDMGGKHLIVLAKNFQGYKNLIKLVSRS
WVDGFYMRPRTDHEDLERYHEGLIVCSACIAGEVPSKVLKGDYEGAREAARWFKRVFGDD
YYLELQRHEVKDPSQRANRQTYPLQQKANKALLEIAKELDIKVVCTNDVHFIEKDDAEAH
DHLICLSTNKDLNDPNRLLYTKQEWFKSKEEMNEVFGDLPEAMQNTCEILDKIELYSIDH
APIMPFYPIPEDFGTEEDLRSSISEEDLFKEFTSDENGQNPLPLEEGKKKIEKLGGIEKL
YRVKFEADYLGKLAYDGAKKLYGEPLTDEVDERIKFELHIMKTMGFPGYFLIVQDFINTA
RNELGVMVGPGRGSAAGSVVAYCLGITKIDPIKYDLLFERFLNPDRISLPDIDTDFDDDG
RGLVLEWVENKYGHENCAHIITYGTMATKNSLKDVARVERVPLDQANYLCKSIPDKLPND
LKMNLTNAVASIPELKQAEESPDEKVRNTIKYAKKLEGTVRGTGVHACGFIICRDPISDW
VPISIAEDKTDPGHKLRCTQYDGHVIEDTGLIKMDFLGLKTLSILKEAVDNIQFTKGIKI
DLDNIPIDDALTYELYSAGKTIGTFQFESPGMQKHLRSLQPTVFEDLIAMNALYRPGPMD
YIPDFIERKKDPSKIQYDIPCMEKYLKDTYGITVYQEQVMLLARQLAGFTRGQSDTLRKA
MGKKLIAQMDKLETLFYEGGVKNGHDQKVLNKIWEDWKKFASYAFNKSHATCYSWVSFQT
AYLKAHYPAEYMAAVLSRNLNNITEVIKFIDECRALGIKVLGPDVNESRQKFSANKDGII
RFGLSAIKGMGDAAAQSIVEERTKNGPYKNIYDFIERVNINAVNKKALELLALSGALDGF
KELKREQYLTKNIKGEPFIDLLVRYGQRYQSEQNQSQNSLFGGDDAAEIPHPTPPEWEEW
SHIELLNRERDCIGIYLSAHPLDEFSMVINNLCNANCNELADNLALASKENVALGGIVTL
SEARTTKKGLPCGFVTIEDFNGSGRLALFGEDWAKWQGMLQEGYPILVRGKSTQRFRNSD
VYDFKVSDIKLLQTVRDTEIQKITLSIDSNDIDENLVTDIVTLAEENKGKVELCFQIIDK
EHNTKLTMRSQTQGVDLTRYFMRYIEQSEQIEYHIN
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atggaagatttcgttcacttacacgtacatacttactattctattctggacggacagtcg
aatattcagaagttagttgataaagcaattaacaacggaatgcgtggtttggcaataaca
gaccacggaaacatgttcggaataaaagaattttacaactattgtaacaaggtaaacggc
aagagaaaagaagagggtctgcctccttttaagcctattcttggttgtgagatgtatgtt
gcaagaaataaaaaggaaagcaagatcaaggaaaatggagacatgggaggtaaacacctc
attgttcttgcaaagaatttccaagggtataaaaacctcattaagttggtttcacgctct
tgggttgatggtttttacatgcgtccacgtaccgatcacgaagatttggaacgctatcat
gaaggattgattgtgtgttcggcatgtattgcgggcgaagttccatctaaagtattaaaa
ggtgactacgaaggagcccgtgaagccgcacgctggttcaaacgagttttcggcgatgat
tattatcttgagcttcaaagacacgaagtaaaagatccaagtcagcgtgctaacagacaa
acatatccacttcaacaaaaagcaaacaaagctcttttggagatcgcaaaggagctagat
atcaaggttgtatgcaccaatgacgtgcattttatagaaaaagatgatgcggaagcacac
gatcatcttatctgtttgtctaccaataaggatttgaacgaccccaatcgtcttctatat
acaaaacaagagtggtttaaatcgaaagaagaaatgaacgaagtttttggtgatttgcct
gaagcaatgcaaaacacttgcgagattttggacaaaattgaactctattcgatcgaccat
gcgcccattatgcccttctatcccattccagaagacttcggaacggaagaggatttgcgc
agttctatttctgaagaagacctctttaaagagtttacttctgacgaaaacggccagaac
ccactaccccttgaggagggaaagaagaagattgagaaacttggaggtattgaaaaacta
tacagagttaagtttgaagccgactatttaggaaaacttgcctatgatggtgcaaagaaa
ttatatggcgagcctttaactgatgaggtggacgagcgtattaagttcgagctacatatc
atgaaaacaatgggtttccctggttacttcttgatcgtacaagattttattaacaccgca
agaaacgaacttggggtgatggttggaccaggaagaggatcggcagcaggctctgttgtg
gcatattgtttaggtattacaaagatagaccccatcaaatacgatttgctttttgagcgt
ttcttgaaccccgatcgtatctctttgcctgatattgataccgacttcgatgatgacggc
cgtggtcttgtgctcgaatgggttgaaaataaatacggacacgagaactgtgcgcacatt
attacatacggaacgatggctactaagaactctttaaaagacgttgcacgtgttgaaagg
gttccattagaccaagctaactacctatgtaagagcattcccgacaagcttcccaatgac
cttaagatgaatttaacgaatgctgtggcttcaattccagagcttaagcaagcggaagaa
tcaccagatgagaaggttcgaaatacaattaaatatgcaaagaagctcgaaggaaccgta
agaggaacgggtgtgcacgcctgtggctttattatttgtagagacccaattagcgattgg
gtacccatatctatagcagaagacaaaacagaccctggacataagttgcgatgtacgcaa
tatgacggtcatgttattgaagatacaggacttattaagatggacttcttgggcttaaag
accctttctatcttaaaagaagcggtggataatattcaattcactaaaggaattaagatc
gatttggataatattccaatcgacgatgctttgacttacgaattgtattcagcaggaaaa
accattggaacatttcagtttgagtcgccaggtatgcagaaacacttacgttctttgcaa
ccaactgtgttcgaagacctcatcgcaatgaacgcattatatcgtccaggacctatggat
tacattccagatttcattgaaagaaagaaagatccgagcaagattcaatacgatattcct
tgtatggagaagtatcttaaggatacatacggcatcactgtgtaccaagaacaggtgatg
ttgcttgcaagacagcttgcaggtttcacacgaggacaaagtgatacgcttcgaaaagca
atgggtaagaaacttattgcacagatggacaagctcgaaaccttgttttatgagggcgga
gtgaagaatggtcacgaccaaaaagtgttgaataagatttgggaagactggaaaaagttt
gcctcttatgcttttaataagagccacgcaacatgctattcgtgggtttcttttcaaact
gcatacctaaaagcacactaccctgctgaatatatggcagctgttctgagtcgaaacttg
aacaatattaccgaagttattaagtttatagacgagtgtagggctcttggtatcaaggtt
ttaggacctgatgtaaatgaaagtagacaaaaatttagtgccaataaagacggaattatt
cgctttggactatctgctatcaagggaatgggcgacgctgctgctcaatctatcgttgaa
gaacgcacaaaaaatggtccttataaaaacatatacgactttatagaacgtgtaaatatc
aatgcggtcaacaaaaaagcacttgagcttttggctctaagtggtgcacttgacggcttt
aaagaattgaaacgagaacaatatctcaccaaaaacattaagggagaaccatttatcgac
cttctagttcgatatggacaacgctatcaaagcgagcaaaatcaatcgcaaaactctctc
tttggcggtgatgatgcagctgaaatacctcatccaacacctcctgaatgggaagaatgg
agccacattgagcttttaaatagagagcgagattgcattggtatctacctttctgctcat
ccactcgacgagtttagcatggtaattaacaacctatgtaatgccaattgcaatgaactt
gccgacaacttggcacttgcttctaaagaaaatgtagcccttggaggtatcgtaacctta
tctgaagcaagaacaacaaagaaaggtttgccttgtggctttgtgactattgaagatttt
aacggctctggtagacttgctttgtttggtgaagactgggcaaaatggcaaggaatgttg
caagaaggctaccccattttggtgagaggaaagtctactcaaaggtttagaaatagcgat
gtttacgactttaaagtaagtgatataaaactattacaaaccgttagagacactgagata
cagaagattacactaagtatagacagtaatgatatcgacgagaatcttgttaccgacatc
gttacacttgccgaggagaacaaaggaaaagttgaattgtgctttcagattatagataag
gaacacaacacaaagctaacgatgcgttcacagacacaaggtgtggacctaactcgttat
tttatgcgttatattgagcaaagtgaacaaatagaatatcatataaattaa
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integrated database retrieval system
