Prevotella sp. oral taxon 299: HMPREF0669_01385
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Entry
HMPREF0669_01385 CDS
T02809
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pro
Prevotella sp. oral taxon 299
Brite
KEGG Orthology (KO) [BR:
pro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pro03032
]
HMPREF0669_01385
03400 DNA repair and recombination proteins [BR:
pro03400
]
HMPREF0669_01385
Enzymes [BR:
pro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HMPREF0669_01385
DNA replication proteins [BR:
pro03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0669_01385
DNA repair and recombination proteins [BR:
pro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0669_01385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
EFC70405
UniProt:
D3ID81
LinkDB
All DBs
Position
541425..543743
Genome browser
AA seq
772 aa
AA seq
DB search
MQQNLVIVESPAKAKTIEKFLGKEFKVMSSYGHIRDLKKKEISIDPKSLDPCYEVPEEKK
KLVSELKRNVEQSKTVWLASDEDREGEAIAWHLCEVLGLDEEKTNRIVFHEITKTAILHA
IETPRQLDMNLVNAQQARRVLDRLVGFKLSPVLWRKVKPALSAGRVQSVAVRLIVERERE
IQAFKTEPYYRVNAIFVLKDGEGNVTELKAELDKRFKNHEEAVSFLEKSKDSTFQIASIA
KKPLKRMPAPPFTTSTLQQEAARKLGFTVSQTMMVAQRLYEGGHITYMRTDSVNLSTLAR
GAAKEEIEKLYGESYSRSRNYQTHAKGAQEAHEAIRPTYMDKTQIDGTAQEKRLYELIWK
RTIASQMAEAQIEKTTVSINVSGANESFTSVGEMITFDGFLKVYRESTDDDDANADEQSH
VLPATLKEGDLLERKEIVSTERFSMAPARYTEASLVHKMEELGIGRPSTYAPTISTIQQR
EYVVKGDKTGEERTYVVDVLKNGKITSTTKKETVGNEKGKLLPTDIGSVVNDFLTANFSD
IVDYNFTAKVESQFDLIAEGKETWKEMMKTFDDEFEPTVDKVMNARSEHKAGERQLGLEP
KTNKPVFVKIGRFGPVVQIGSAGDTDKPRFAQVPTGKSIETITLEEALELFKLPRVLGQF
EGEDVIVGAGRFGPYIQHNKQYISLPKGEDPMSVTLGHAVALIETKRLQEKQRHLKDFGE
GVNLEILNGRYGPYICYEGKNYRLPKNLHAKAAELTYGECMDVVKASAEKKK
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaatttagttatcgtagagagccccgctaaggcaaaaacaatagagaagttt
cttggaaaagagtttaaggtgatgtctagttatggacatatacgagatttaaagaaaaaa
gaaatcagtatagatccaaagagtttagatccttgttatgaagttcctgaagaaaagaag
aaacttgtttcagaattaaaacgaaatgtagaacaaagtaaaacggtttggttagcatcc
gatgaggaccgtgaaggagaagctattgcatggcacttgtgcgaggttttagggttagac
gaagagaaaaccaatagaattgtgtttcatgagataacaaaaacagccatacttcatgcg
atagaaacacctcgtcagcttgatatgaacttggtaaatgcacaacaagcacgtcgagtt
ttggatagattggtgggcttcaagctatctccagtgttgtggagaaaggtaaaaccagct
ctttctgcaggtcgtgtgcaaagtgttgccgtacgtttgattgttgaaagagaacgtgag
atacaagcattcaaaaccgaaccctattatagagtgaatgctatctttgtgttgaaagat
ggagaagggaatgtaacagaacttaaagcagaattggataaacgctttaagaatcacgaa
gaggctgtttctttccttgaaaaaagtaaagattcaaccttccaaatcgcatcaatagca
aagaaaccgctaaagagaatgcctgcaccaccattcacaacatcgacacttcaacaagaa
gctgcacgcaaattgggctttacagtgtcgcaaacaatgatggttgcgcaacgtctttac
gaaggtggacacattacatacatgcgtaccgacagcgtgaacctatctactttggctcga
ggagcagcgaaagaagaaatagaaaagctatatggtgagtcgtatagtcgctctcgcaac
tatcaaactcatgcaaaaggcgcacaagaagcacacgaagctattcgcccaacctatatg
gataaaacgcaaatagatggaactgcgcaagaaaaaagattgtatgagttgatttggaag
cgcaccattgcaagtcaaatggcagaggctcaaatcgagaaaacaaccgtgtcgataaac
gttagcggtgcaaacgagagctttacctctgttggtgagatgataacatttgatggattt
ttgaaagtttatcgtgaatctaccgatgacgatgatgcaaatgcagacgaacaatcgcat
gttttgcctgcaactcttaaagaaggcgacttgttagaacgtaaagaaattgtttcaact
gaacgctttagcatggctccagcacgctatacagaagcaagtttggtgcataaaatggaa
gaattgggtattggacgcccatcaacatacgctccaactatcagtactatacaacaaaga
gagtatgtagtgaaaggagataaaacaggagaagaacgcacttatgtggtggatgtcttg
aaaaatggcaagataacatcgacaactaagaaagaaacagtgggcaatgaaaagggcaaa
ctcttacctactgacattggttctgtggtgaacgatttcctaacagctaacttctcagac
atcgtagactacaactttacggcaaaagtagaaagtcaattcgaccttattgcagaggga
aaagagacttggaaggaaatgatgaagacctttgacgacgagtttgaacctactgttgat
aaggtgatgaatgctcgttcggagcataaagcaggcgaaagacaattgggtttagagcct
aaaacaaataaacccgtatttgttaagataggacgttttggtccagttgtgcagattggt
agtgcaggagatactgataaacctcgctttgcacaagttcctacaggaaagagtattgaa
acaatcactttagaagaggctcttgaattgtttaaattgccaagagttcttggtcaattc
gaaggcgaagacgttatagttggtgcaggaagatttggtccttatattcaacataacaag
cagtatatatctcttccaaagggagaagacccaatgtcggttactttaggacatgctgtt
gcgttaatagaaacaaagagattgcaagagaaacaacgtcacttgaaagactttggcgaa
ggggttaacctcgaaatccttaacggacgttatggaccttacatctgttacgaaggaaaa
aactatcgcttgcccaaaaacttacatgcaaaagcagcagaattgacctatggtgagtgc
atggatgttgtgaaagcatcggcagaaaagaagaaatga
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